ID | 4821 | ||||||
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Name | CDO1338 (GRAINGENES PROBE) | ||||||
Synonyms (5) |
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Type | RFLP | ||||||
Species | Avena sativa (Oat) [ GR_tax:012534 ] | ||||||
Germplasm | |||||||
Description | |||||||
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | CDO1338 |
DNA Treatment | |
Source Type | cDNA |
Source Tissue | etiolated leaf |
Source Treatment | etiolated |
Vector | pBluSK |
Vector Antibiotic Resistance | Ampicillin |
Fragment Size | 1.2 |
Vector Excision Enzyme | EcoRI/XhoI |
Vector Primers | M13 forward/M13 reverse |
Overgo1 | |
Overgo2 |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Cornell Diploid 1995 | BNL6.32 | E | 23.9-23.9 cM | View Comparative Map | |||
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Oat, KxO, 2003 | BNL6.32 | 29_43 | 44.9-44.9 cM | View Comparative Map | ||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Composite 2004 | BNL6.32 | 5B | 42-42 cM | View Comparative Map | |||
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QTL | Wheat composite QTL 2004 | BNL6.32 | 5B | 42-42 cM | View Comparative Map | |||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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QTL | Cornell Jef/Oruf BC QTL 2003 | BNL6.32 | 12 | 0-0 cM | View Comparative Map | |||
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Cornell V20A/Oruf QTL 1998 | BNL6.32 | 11 | 0-0 cM | View Comparative Map | ||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Cornell RFLP 1994 | BNL6.32 | 11 | 0-0 cM | View Comparative Map | |||
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Cornell RFLP 2001 | BNL6.32 | 11 | 0-0 cM | View Comparative Map | ||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Cornell Wilson 1999 | BNL6.32 | 3 | 150.9-150.9 cM | View Comparative Map | |||
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BNL6.32 | 10 | 17.1-17.1 cM | View Comparative Map | |||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 3 | 34,442,448-34,442,681 bp | View Comparative Map | |||
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BNL6.32 | Chr. 11 | 28,284,088-28,284,314 bp | View Comparative Map | |||||
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BNL6.32 | Chr. 11 | 28,284,842-28,284,969 bp | View Comparative Map | |||||
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Species | Type | Name | Assoc. Type |
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Triticum aestivum | Breakpoint Interval | 5AS1-0.40-0.75 | Wheat-EST-BI |
Triticum aestivum | Breakpoint Interval | 5BS4-0.43-0.56 | Wheat-EST-BI |
Oryza sativa | QTL | AQBS060 | qtl_marker |
Oryza sativa | QTL | AQFE036 | qtl_marker |
Zea mays subsp. mays | Maize Bin | Bin 10.00 | bin_marker |
Zea mays subsp. mays | Maize Bin | Bin 3.09 | bin_marker |
Avena sativa | Probed Site | cdo1338a | maizegdb_to_gramene |
Avena sativa | Probed Site | cdo1338b | maizegdb_to_gramene |
Avena sativa | EST | AA231929 | related_sequence |
Avena sativa | EST | BE439211 | related_sequence |