ID | 4810 | ||||||||||||
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Name | BCD926 (GRAINGENES PROBE) | ||||||||||||
Synonyms (11) |
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Type | RFLP | ||||||||||||
Species | Hordeum vulgare (Barley) [ GR_tax:013383 ] | ||||||||||||
Germplasm | |||||||||||||
Description | |||||||||||||
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | BCD926 |
DNA Treatment | |
Source Type | cDNA |
Source Tissue | etiolated leaf |
Source Treatment | etiolated |
Vector | pBluSK- |
Vector Antibiotic Resistance | Ampicillin |
Fragment Size | 1.4 |
Vector Excision Enzyme | EcoRI |
Vector Primers | M13 forward/M13 reverse |
Overgo1 | SOG0094 |
Overgo2 |
CTGATTTTGACCTCTCTCTTCGTTGTTCAGTTAGCCCAACCGTGATCAGGGGTGCAAATCCTGGCTTAGACGCGCTGCAG
AGGAATAATGCAGCATACTGCGTCCAGCCTGCTTGCATTCAGCCATCATGTGTTGTTCCAACCACATGCTTTGGTCCTCG
GTTCTTCTCGAAATCCAAGTCCAAGTCAAAGTCCAAGAAGGAGAAGCCAAAGCCAGACATCGCGAACCAGGTTAACCTAT
TCCCTGAGATGATCGCCGAGCCAACTGATGCTCGGTCCATGTCCTTTGTCGGCACCCACGAGTACCTGGCCC
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Close 2943-SNP 2009 | BNL6.32 | 5H | 142.37 | View Comparative Map | |||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Composite 2004 | BNL6.32 | 5A | 44-44 cM | View Comparative Map | |||
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Cornell Synthetic/Opata 1995 | BNL6.32 | 5A | 35.4-35.4 cM | View Comparative Map | ||||
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QTL | Synthetic/Opata RI RFLP/SSR QTL 1995 | BNL6.32 | 5A | 35.4-35.4 cM | View Comparative Map | |||
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Wheat composite QTL 2004 | BNL6.32 | 5A | 44-44 cM | View Comparative Map | ||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Cornell Diploid 1995 | BNL6.32 | E | 98.6-98.6 cM | View Comparative Map | |||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | KRGRP 1998 | BNL6.32 | 3 | 222.2-222.2 cM | View Comparative Map | |||
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QTL | KRGRP Mil23/Gih QTL 1998 | BNL6.32 | 3 | 222.2-222.2 cM | View Comparative Map | |||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Cornell RFLP 1994 | BNL6.32 | 9 | 52.7-52.7 cM | View Comparative Map | |||
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Cornell RFLP 2001 | BNL6.32 | 9 | 54.45-54.45 cM | View Comparative Map | ||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Paterson 2003 | BNL6.32 | A | 0.8-0.8 cM | View Comparative Map | |||
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BNL6.32 | B | 56.2-56.2 cM | View Comparative Map | |||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Cornell Wilson 1999 | BNL6.32 | 7 | 78.6-78.6 cM | View Comparative Map | |||
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IBM 2002 | BNL6.32 | 2 | 366.4-366.4 cM | View Comparative Map | ||||
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BNL6.32 | 7 | 260.9-260.9 cM | View Comparative Map | |||||
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SSR IBM 2001 | BNL6.32 | 2 | 321.5-321.5 cM | View Comparative Map | ||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 9 | 18,341,589-18,341,907 bp | View Comparative Map | |||
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Species | Type | Name | Assoc. Type |
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Zea mays subsp. mays | Maize Bin | Bin 2.07 | bin_marker |
Zea mays subsp. mays | Maize Bin | Bin 7.03 | bin_marker |
Triticum aestivum | Breakpoint Interval | C-5DL1-0.60 | Wheat-EST-BI |
Hordeum vulgare | Probed Site | bcd926a | maizegdb_to_gramene |
Hordeum vulgare | Probed Site | bcd926b | maizegdb_to_gramene |
Hordeum vulgare subsp. vulgare | EST | AA231934 | related_sequence |
BCD926 BROWS Autorad: Survey blot of the probe BCD926 for the comparative barley/rice/oat/wheat/sugarcane project | |
BCD926 SL Autorad: Survey blot of the probe BCD926 for the BS125/2/BS125/WLO2 population |