ID | 4769 | ||||
---|---|---|---|---|---|
Name | CDO595 (GRAINGENES PROBE) | ||||
Synonyms (3) |
|
||||
Type | RFLP | ||||
Species | Avena sativa (Oat) [ GR_tax:012534 ] | ||||
Germplasm | |||||
Description | |||||
Tags () | None |
Marker Created: | |
---|---|
Marker Updated: | |
Internal Marker Accession: | CDO595 |
DNA Treatment | |
Source Type | cDNA |
Source Tissue | etiolated leaf |
Source Treatment | etiolated |
Vector | pBluSK |
Vector Antibiotic Resistance | Ampicillin |
Fragment Size | 1.5 |
Vector Excision Enzyme | EcoRI/XhoI |
Vector Primers | M13 forward/M13 reverse |
Overgo1 | |
Overgo2 |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Genetic | Cornell Diploid 1995 | BNL6.32 | D | 34.1-34.1 cM | View Comparative Map | |||
|
||||||||
Oat, KxO, 2003 | BNL6.32 | 6 | 24.9-24.9 cM | View Comparative Map | ||||
|
||||||||
QTL | Cornell Kan/Ogl QTL 1995 | BNL6.32 | 6 | 84.5-84.5 cM | View Comparative Map | |||
|
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Genetic | Barley consensus - 1995 | BNL6.32 | 7H | 2.5-2.5 cM | View Comparative Map | |||
|
||||||||
Barley consensus 2 - 1996 | BNL6.32 | 7H | 73.7-73.7 cM | View Comparative Map | ||||
|
||||||||
Barley consensus 2003 | BNL6.32 | 7H | 82-82 cM | View Comparative Map | ||||
|
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Genetic | Composite 2004 | BNL6.32 | 7A | 103-103 cM | View Comparative Map | |||
|
||||||||
BNL6.32 | 7B | 46-46 cM | View Comparative Map | |||||
|
||||||||
Cornell Synthetic/Opata 1995 | BNL6.32 | 7A | 117.4-117.4 cM | View Comparative Map | ||||
|
||||||||
QTL | Synthetic/Opata RI RFLP/SSR QTL 1995 | BNL6.32 | 7A | 117.4-117.4 cM | View Comparative Map | |||
|
||||||||
Wheat composite QTL 2004 | BNL6.32 | 2R | 46-46 cM | View Comparative Map | ||||
|
||||||||
BNL6.32 | 2R | 103-103 cM | View Comparative Map | |||||
|
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
QTL | Cornell V20A/glab QTL 2004 | BNL6.32 | 8 | 70.7-70.7 cM | View Comparative Map | |||
|
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Genetic | Cornell RFLP 1994 | BNL6.32 | 8 | 82.5-82.5 cM | View Comparative Map | |||
|
||||||||
Cornell RFLP 2001 | BNL6.32 | 8 | 100.35-100.35 cM | View Comparative Map | ||||
|
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Genetic | BNL 1996 | BNL6.32 | 1 | 130.8-130.8 cM | View Comparative Map | |||
|
||||||||
Cornell Wilson 1999 | BNL6.32 | 1 | 123.2-123.2 cM | View Comparative Map | ||||
|
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 8 | 25,869,956-25,870,108 bp | View Comparative Map | |||
|
||||||||
BNL6.32 | Chr. 8 | 25,869,964-25,870,108 bp | View Comparative Map | |||||
|
Species | Type | Name | Assoc. Type |
---|---|---|---|
Avena sativa | QTL | AQDF318 | qtl_marker |
Avena sativa | QTL | AQDF321 | qtl_marker |
Avena sativa | QTL | AQDF323 | qtl_marker |
Avena sativa | QTL | AQDF329 | qtl_marker |
Avena sativa | QTL | AQDF332 | qtl_marker |
Zea mays subsp. mays | Maize Bin | Bin 1.06 | bin_marker |
Avena sativa | Probed Site | cdo595 | maizegdb_to_gramene |
Avena sativa | EST | AA231925 | related_sequence |
Avena sativa | EST | BE439214 | related_sequence |
CDO595 SL Autorad: Survey blot of the probe CDO595 for the BS125/2/BS125/WLO2 population |