ID | 4766 | ||||||||||||
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Name | CDO407 (GRAINGENES PROBE) | ||||||||||||
Synonyms (12) |
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Type | RFLP | ||||||||||||
Species | Avena sativa (Oat) [ GR_tax:012534 ] | ||||||||||||
Germplasm | |||||||||||||
Description | |||||||||||||
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | CDO407 |
DNA Treatment | |
Source Type | cDNA |
Source Tissue | etiolated leaf |
Source Treatment | etiolated |
Vector | pBluSK |
Vector Antibiotic Resistance | Ampicillin |
Fragment Size | 1.1 |
Vector Excision Enzyme | EcoRI/XhoI |
Vector Primers | M13 forward/M13 reverse |
Overgo1 | SOG1038 |
Overgo2 |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Cornell Diploid 1995 | BNL6.32 | D | 34.6-34.6 cM | View Comparative Map | |||
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Oat, KxO, 2003 | BNL6.32 | 6 | 24.9-24.9 cM | View Comparative Map | ||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Composite 2004 | BNL6.32 | 3D | 52-52 cM | View Comparative Map | |||
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Cornell Synthetic/Opata 1995 | BNL6.32 | 3D | 56.9-56.9 cM | View Comparative Map | ||||
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QTL | Synthetic/Opata RI RFLP/SSR QTL 1995 | BNL6.32 | 3D | 56.9-56.9 cM | View Comparative Map | |||
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Wheat composite QTL 2004 | BNL6.32 | 3D | 52-52 cM | View Comparative Map | ||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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QTL | IRRI IR622/IR600 QTL 2003 | BNL6.32 | 7 | 69.5-69.5 cM | View Comparative Map | |||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Cornell RFLP 1994 | BNL6.32 | 7 | 77.5-77.5 cM | View Comparative Map | |||
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Cornell RFLP 2001 | BNL6.32 | 7 | 34.4-34.4 cM | View Comparative Map | ||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Paterson 2003 | BNL6.32 | B | 73.1-73.1 cM | View Comparative Map | |||
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BNL6.32 | G | 53.1-53.1 cM | View Comparative Map | |||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Cornell Wilson 1999 | BNL6.32 | 7 | 50.2-50.2 cM | View Comparative Map | |||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 7 | 10,066,602-10,066,704 bp | View Comparative Map | |||
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BNL6.32 | Chr. 7 | 10,066,667-10,066,704 bp | View Comparative Map | |||||
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Species | Type | Name | Assoc. Type |
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Zea mays subsp. mays | Maize Bin | Bin 7.02 | bin_marker |
Avena sativa | Probed Site | cdo407 | maizegdb_to_gramene |
Avena sativa | EST | BE439062 | related_sequence |
Avena sativa | EST | BE439113 | related_sequence |
Avena sativa | EST | AA231762 | related_sequence |
CDO407 BROWS Autorad: Survey blot of the probe CDO407 for the comparative barley/rice/oat/wheat/sugarcane project | |
CDO407 SL Autorad: Survey blot of the probe CDO407 for the BS125/2/BS125/WLO2 population |