ID | 4761 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Name | BCD147 (GRAINGENES PROBE) | ||||||||||||||||
Synonyms (15) |
|
||||||||||||||||
MAIZEGDB PROBE | p-bcd147L: | ||||||||||||||||
Type | RFLP | ||||||||||||||||
Species | Hordeum vulgare (Barley) [ GR_tax:013383 ] | ||||||||||||||||
Germplasm | |||||||||||||||||
Description | |||||||||||||||||
Tags () | None |
Marker Created: | |
---|---|
Marker Updated: | |
Internal Marker Accession: | BCD147 |
DNA Treatment | |
Source Type | cDNA |
Source Tissue | etiolated leaf |
Source Treatment | etiolated |
Vector | pBluSK- |
Vector Antibiotic Resistance | Ampicillin |
Fragment Size | 0.9 |
Vector Excision Enzyme | EcoRI |
Vector Primers | M13 forward/M13 reverse |
Overgo1 | SOG0089 |
Overgo2 |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Genetic | Barley consensus 2003 | BNL6.32 | 5H | 28.5-28.5 cM | View Comparative Map | |||
|
||||||||
BNL6.32 | 7H | 83.1-83.1 cM | View Comparative Map | |||||
|
||||||||
QTL | UMN Fred/Stan QTL 2003 | BNL6.32 | 7H | 101.7-101.7 cM | View Comparative Map | |||
|
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Genetic | Composite 2004 | BNL6.32 | 3B | 63-63 cM | View Comparative Map | |||
|
||||||||
Cornell Synthetic/Opata 1995 | BNL6.32 | 3B | 150.4-150.4 cM | View Comparative Map | ||||
|
||||||||
QTL | Synthetic/Opata RI RFLP/SSR QTL 1995 | BNL6.32 | 3B | 150.4-150.4 cM | View Comparative Map | |||
|
||||||||
Wheat composite QTL 2004 | BNL6.32 | 6R | 63-63 cM | View Comparative Map | ||||
|
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Genetic | Cornell Diploid 1995 | BNL6.32 | D | 33.5-33.5 cM | View Comparative Map | |||
|
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
QTL | Minnesota John/Dor F2 QTL 2000 | BNL6.32 | 8 | 25-25 cM | View Comparative Map | |||
|
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
QTL | CIRAD IR64/Azu DH QTL 2003 | BNL6.32 | 6 | 210.6-210.6 cM | View Comparative Map | |||
|
||||||||
Cornell V20A/glab QTL 2004 | BNL6.32 | 8 | 23.6-23.6 cM | View Comparative Map | ||||
|
||||||||
Cornell V20A/Oruf QTL 1998 | BNL6.32 | 8 | 0-0 cM | View Comparative Map | ||||
|
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Genetic | Cornell RFLP 1994 | BNL6.32 | 8 | 36.3-36.3 cM | View Comparative Map | |||
|
||||||||
Cornell RFLP 2001 | BNL6.32 | 8 | 53.3-53.3 cM | View Comparative Map | ||||
|
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Genetic | Klein 2004 | BNL6.32 | LG-07 | 71.8-71.8 cM | View Comparative Map | |||
|
||||||||
Mace 2009 | BNL6.32 | 7 | 65.7-67.2 cM | View Comparative Map | ||||
|
||||||||
Paterson 2003 | BNL6.32 | I | 51.6-51.6 cM | View Comparative Map | ||||
|
||||||||
BNL6.32 | J | 54.7-54.7 cM | View Comparative Map | |||||
|
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Genetic | Cornell Wilson 1999 | BNL6.32 | 10 | 55.3-55.3 cM | View Comparative Map | |||
|
||||||||
IBM 2002 | BNL6.32 | 10 | 152.6-152.6 cM | View Comparative Map | ||||
|
||||||||
SSR IBM 2001 | BNL6.32 | 10 | 109.1-109.1 cM | View Comparative Map | ||||
|
||||||||
UMC 1998 | BNL6.32 | 10 | 60.4-60.4 cM | View Comparative Map | ||||
|
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 8 | 5,748,701-5,749,282 bp | View Comparative Map | |||
|
||||||||
BNL6.32 | Chr. 12 | 11,275,199-11,275,278 bp | View Comparative Map | |||||
|
Species | Type | Name | Assoc. Type |
---|---|---|---|
Oryza sativa | QTL | AQBS006 | qtl_marker |
Oryza sativa | QTL | AQBS014 | qtl_marker |
Oryza sativa | QTL | AQBS038 | qtl_marker |
Oryza sativa | QTL | AQBS045 | qtl_marker |
Oryza sativa | QTL | AQBS053 | qtl_marker |
Oryza sativa | QTL | AQBS058 | qtl_marker |
Oryza sativa | QTL | AQBS066 | qtl_marker |
Oryza sativa | QTL | AQFA019 | qtl_marker |
Hordeum vulgare | QTL | AQFH024 | qtl_marker |
Zea mays subsp. mays | Maize Bin | Bin 10.03 | bin_marker |
Hordeum vulgare | Probed Site | bcd147(gbp) | maizegdb_to_gramene |
Hordeum vulgare | EST | BE438614 | related_sequence |
Hordeum vulgare | EST | BE438730 | related_sequence |
Hordeum vulgare subsp. vulgare | EST | AA231672 | contained_in_sequence |
Hordeum vulgare subsp. vulgare | EST | AA231905 | related_sequence |
BCD147 SL Autorad: Survey blot of the probe BCD147 for the BS125/2/BS125/WLO2 population |