ID | 17681 | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Name | BCD738 (GRAINGENES PROBE) | ||||||||||||
Synonyms (12) |
|
||||||||||||
MAIZEGDB PROBE | p-bcd738 | ||||||||||||
Type | RFLP | ||||||||||||
Species | Hordeum vulgare (Barley) [ GR_tax:013383 ] | ||||||||||||
Germplasm | |||||||||||||
Description | |||||||||||||
Tags () | None |
Marker Created: | |
---|---|
Marker Updated: | |
Internal Marker Accession: | BCD738 |
DNA Treatment | |
Source Type | cDNA |
Source Tissue | etiolated leaf |
Source Treatment | etiolated |
Vector | pBluSK- |
Vector Antibiotic Resistance | Ampicillin |
Fragment Size | 0.8 |
Vector Excision Enzyme | EcoRI |
Vector Primers | M13 forward/M13 reverse |
Overgo1 | SOG0093 |
Overgo2 |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
QTL | UMN Fred/Stan QTL 2003 | BNL6.32 | 1H | 73.9-73.9 cM | View Comparative Map | |||
|
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Genetic | Composite 2004 | BNL6.32 | 1A | 70-70 cM | View Comparative Map | |||
|
||||||||
QTL | Wheat composite QTL 2004 | BNL6.32 | 1R | 70-70 cM | View Comparative Map | |||
|
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
QTL | Minnesota John/Dor F2 QTL 2000 | BNL6.32 | 5 | 200-200 cM | View Comparative Map | |||
|
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
QTL | IRRI IR622/IR600 QTL 2003 | BNL6.32 | 5 | 115.3-115.3 cM | View Comparative Map | |||
|
||||||||
JNIG W1944/Peik QTL 2002 | BNL6.32 | 5 | 90.8-90.8 cM | View Comparative Map | ||||
|
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Genetic | Cornell RFLP 1994 | BNL6.32 | 5 | 98.2-98.2 cM | View Comparative Map | |||
|
||||||||
Cornell RFLP 2001 | BNL6.32 | 5 | 89.2-89.2 cM | View Comparative Map | ||||
|
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Genetic | Klein 2004 | BNL6.32 | LG-03 | 149.1-149.1 cM | View Comparative Map | |||
|
||||||||
Mace 2009 | BNL6.32 | 3 | 129-129 cM | View Comparative Map | ||||
|
||||||||
Paterson 2003 | BNL6.32 | G | 37.7-37.7 cM | View Comparative Map | ||||
|
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Genetic | Cornell Wilson 1999 | BNL6.32 | 6 | 118.2-118.2 cM | View Comparative Map | |||
|
||||||||
BNL6.32 | 8 | 92.3-92.3 cM | View Comparative Map | |||||
|
||||||||
IBM 2002 | BNL6.32 | 6 | 363.6-363.6 cM | View Comparative Map | ||||
|
||||||||
UMC 1998 | BNL6.32 | 3 | 108.3-108.3 cM | View Comparative Map | ||||
|
||||||||
BNL6.32 | 6 | 117.3-117.3 cM | View Comparative Map | |||||
|
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 5 | 24,316,513-24,316,770 bp | View Comparative Map | |||
|
||||||||
BNL6.32 | Chr. 5 | 24,316,513-24,316,805 bp | View Comparative Map | |||||
|
||||||||
BNL6.32 | Chr. 5 | 24,316,513-24,317,000 bp | View Comparative Map | |||||
|
||||||||
BNL6.32 | Chr. 5 | 24,316,613-24,317,105 bp | View Comparative Map | |||||
|
||||||||
BNL6.32 | Chr. 5 | 24,316,751-24,317,105 bp | View Comparative Map | |||||
|
Species | Type | Name | Assoc. Type |
---|---|---|---|
Oryza sativa | QTL | AQDX008 | qtl_marker |
Oryza sativa | QTL | AQF064 | qtl_marker |
Oryza sativa | QTL | AQF131 | qtl_marker |
Oryza sativa | QTL | AQF139 | qtl_marker |
Oryza sativa | QTL | AQF148 | qtl_marker |
Zea mays subsp. mays | Maize Bin | Bin 3.06 | bin_marker |
Zea mays subsp. mays | Maize Bin | Bin 6.06 | bin_marker |
Zea mays subsp. mays | Maize Bin | Bin 8.05 | bin_marker |
Hordeum vulgare | Probed Site | bcd738a(pgk) | maizegdb_to_gramene |
Hordeum vulgare | Probed Site | bcd738b(pgk) | maizegdb_to_gramene |
Hordeum vulgare | Probed Site | bcd738c(pgk) | maizegdb_to_gramene |
Hordeum vulgare subsp. vulgare | OVERGO | SOG0093 | related_probe |
Hordeum vulgare subsp. vulgare | EST | AA231872 | related_sequence |
Hordeum vulgare | EST | BE438627 | related_sequence |
Hordeum vulgare | EST | BE438675 | related_sequence |
Hordeum vulgare | EST | BE438764 | related_sequence |
Hordeum vulgare subsp. vulgare | EST | AA231880 | contained_in_sequence |
BCD738 SL Autorad: Survey blot of the probe BCD738 for the BS125/2/BS125/WLO2 population |