ID | 17156 |
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Name | RG417 |
Synonyms (0) | None. |
Type | RFLP |
Species | Oryza sativa (Oryza sativa) [ GR_tax:013681 ] |
Germplasm | |
Description | |
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | RG417 |
DNA Treatment | PstI-digested |
Source Type | Genomic |
Source Tissue | leaf |
Source Treatment | |
Vector | pGEM4Z |
Vector Antibiotic Resistance | Ampicillin |
Fragment Size | 1.3 |
Vector Excision Enzyme | PstI |
Vector Primers | M13 forward/M13 reverse |
Overgo1 | |
Overgo2 |
GAGGTGATCAATGGCGAGGAGCAGCCTTGGTATCACAGAAACATTACCCTGGAACAGCTAGACAAGGTCATGCTGCCAAA
GGAATAGGTAGCATCAATCAGAATTCTGAAGCAACAGCACACCAGCTTCTCTGGAAGTCAAAACATGAAGCTGCATTCTT
TCATTTGGGGAAGACGAGAATGAATATGCCGAGCACATTGAGCACTGCTAGGGAAGCAACTGTGTCGAGACGACAGGAAC
TTGATCTGGAGAGCCGGGCAGATGTGATCTCTGAGTTCCTCAAGTTGTGGGTTGAGCGTGCGCCTGTCCAGATGCAGCGC
TCAATTGTAGACTGGATTCAGAAAGAGAAGGAAGTGCAGTTAGCGCCAACACCATTCTAGAATTCTAGATCATGTAAGAG
AGATCGATGAGGGTAACAAGGGGAATGGATANGAAGTCTTCATGATGAGAATGGNCTTGTTANNCTTAATTTNAAGGCCA
GCAATAACTTGTNTGACAATGGGGTTCCTTNANGTGANCCCNGCTGNTNAGNCCATNATTTNNGCATCTGGNNNTACNNT
GGG
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 7 | 1,160,982-1,161,434 bp | View Comparative Map | |||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Genetic | TTU CTIR 2000 | BNL6.32 | 7 | 0-0 cM | View Comparative Map | |||
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QTL | Cornell 9024/LH422 RI QTL 1996 | BNL6.32 | 7 | 81.8-81.8 cM | View Comparative Map | |||
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Cornell IR64/IRG105 QTL 2003 | BNL6.32 | 7 | 22.1-22.1 cM | View Comparative Map | ||||
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CTIR CT9993/IR6226 QTL 2000 | BNL6.32 | 7 | 0-0 cM | View Comparative Map | ||||
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MU CT9993/IR6226 QTL 2004 | BNL6.32 | 7 | 0-0 cM | View Comparative Map | ||||
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TNCGEB CT9993/IR6226 QTL 2004 | BNL6.32 | 7 | 0-0 cM | View Comparative Map | ||||
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TTU IR64/Orufi RI QTL 2003 | BNL6.32 | 7 | 120.9-120.9 cM | View Comparative Map | ||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Genetic | Cornell RFLP 1994 | BNL6.32 | 7 | 21-21 cM | View Comparative Map | |||
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Cornell RFLP 2001 | BNL6.32 | 7 | -1.5--1.5 cM | View Comparative Map | ||||
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Species | Type | Name | Assoc. Type |
---|---|---|---|
Oryza sativa | QTL | AQED003 | qtl_marker |
Oryza sativa | QTL | AQED046 | qtl_marker |
Oryza sativa | QTL | AQEE007 | qtl_marker |
Oryza sativa | QTL | AQEE010 | qtl_marker |
Oryza sativa | QTL | AQEE024 | qtl_marker |
Oryza sativa | QTL | AQEE026 | qtl_marker |
Oryza sativa | QTL | AQEE028 | qtl_marker |
Oryza sativa | QTL | AQEE030 | qtl_marker |
Oryza sativa | QTL | AQEE032 | qtl_marker |
Oryza sativa | QTL | AQEE034 | qtl_marker |
Oryza sativa | QTL | AQEE036 | qtl_marker |
Oryza sativa | QTL | AQEE038 | qtl_marker |
Oryza sativa | QTL | AQFT014 | qtl_marker |
Oryza sativa | QTL | AQFT040 | qtl_marker |
Oryza sativa | QTL | CQAS81 | qtl_marker |
Oryza sativa | QTL | CQAS91 | qtl_marker |
Oryza sativa | QTL | CQH26 | qtl_marker |
Oryza sativa | QTL | DQA3 | qtl_marker |
Oryza sativa Indica Group | GSS | AQ074274 | related_sequence |