ID | 16879 | ||
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Name | RG716 | ||
Synonyms (2) |
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Type | RFLP | ||
Species | Oryza sativa (Oryza sativa) [ GR_tax:013681 ] | ||
Germplasm | |||
Description | |||
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | RG716 |
DNA Treatment | PstI-digested |
Source Type | Genomic |
Source Tissue | leaf |
Source Treatment | |
Vector | pGEM4Z |
Vector Antibiotic Resistance | Ampicillin |
Fragment Size | 2.4 |
Vector Excision Enzyme | PstI |
Vector Primers | M13 forward/M13 reverse |
Overgo1 | SOG2302 |
Overgo2 |
Gramene Literature | McCouch-S-R, Kochert-G, Yu-Z-H, Wang-Z-Y, Khush-G-S, Coffman-W-R, Tanksley-S-D, "Molecular mapping of rice chromosomes", Theoretical and applied genetics, 1988, vol. 76, pp. 815-829 |
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Gramene Diversity Rice Marker | 326 |
Gramene Diversity Rice Marker | 807 |
AGGGGGCAGGCATCACTTGCAGCTCCCAATCACCTCGCCGTGTGATCGCCCTAGACCTCTCATCANAAGGCATCACAGGC
TCCATACCACCTTGCATTGCCAACCTCACCTTTCTTACAATGTTGCAACTGTCAAACAATAGCTTCCATGGGAGCATACC
ACCTGAGCTTGGCCTCCTAAACCAACTGAGCTACCTCAACCTCANCACGAACTCTTTGGAAGGTAACATCCCATCTGANC
NCTCTTCATGNTCCCAGCTTAAAATTCTTGACCTTAGCAACAACAATCTCCAAGGGAGCATCCCTTCTGCTTTTGGGGAC
TTACCTTTGCTACAANAACTAGTCCNTGCCAACAGCAGGCTTGCAGGTGNAATACCAGAGTCTTTANGAAGCAGCATATC
AGNTCACANATGTTGGNCCTTGGAAACCAACCGCTCNTCACAAGGGNNGAATCCACGANGNCCTNGGG
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 6 | 22,862,400-22,862,821 bp | View Comparative Map | |||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | KRGRP 1998 | BNL6.32 | 6 | 63.2-63.2 cM | View Comparative Map | |||
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TTU CTIR 2000 | BNL6.32 | 6 | 88.3-88.3 cM | View Comparative Map | ||||
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TTU IRIR 2000 | BNL6.32 | 6 | 102.7-102.7 cM | View Comparative Map | ||||
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QTL | CNRRI Tes/CB QTL 1998 | BNL6.32 | 6b | 60.8-60.8 cM | View Comparative Map | |||
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Cornell V20A/glab QTL 2004 | BNL6.32 | 6 | 79.7-79.7 cM | View Comparative Map | ||||
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CTIR CT9993/IR6226 QTL 2000 | BNL6.32 | 6 | 88.3-88.3 cM | View Comparative Map | ||||
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IGCAS ZYQ8/JX17 F2 QTL 1995 | BNL6.32 | 6 | 100-100 cM | View Comparative Map | ||||
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IRRI IR622/IR600 QTL 2003 | BNL6.32 | 6 | 68.5-68.5 cM | View Comparative Map | ||||
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IRRI Pal/IR42 F2 QTL 1995 | BNL6.32 | 6a | 136.4-136.4 cM | View Comparative Map | ||||
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KRGRP Mil23/Gih QTL 1998 | BNL6.32 | 6 | 63.2-63.2 cM | View Comparative Map | ||||
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MU CT9993/IR6226 QTL 2004 | BNL6.32 | 6 | 102.3-102.3 cM | View Comparative Map | ||||
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TAMU Lem/Teq RI QTL 1995 | BNL6.32 | 6 | 149-149 cM | View Comparative Map | ||||
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TNCGEB CT9993/IR6226 QTL 2004 | BNL6.32 | 6 | 77-77 cM | View Comparative Map | ||||
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TTU IR58821/IR52561 QTL 2002 | BNL6.32 | 6 | 102.7-102.7 cM | View Comparative Map | ||||
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UCD Lab/Bla QTL 1998 | BNL6.32 | 6 | 69-69 cM | View Comparative Map | ||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Paterson 2003 | BNL6.32 | I | 50.8-50.8 cM | View Comparative Map | |||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | IGCN sativa/eichingeri RFLP | BNL6.32 | 6 | 94.9-94.9 cM | View Comparative Map | |||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Cornell RFLP 1994 | BNL6.32 | 6 | 88.1-88.1 cM | View Comparative Map | |||
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Cornell RFLP 2001 | BNL6.32 | 6 | 76.55-76.55 cM | View Comparative Map | ||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Huazhong RFLP 1997 | BNL6.32 | 6 | 93.2-93.2 cM | View Comparative Map | |||
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