ID | 12002 |
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Name | RG101 |
Synonyms (0) | None. |
Type | RFLP |
Species | Oryza sativa (Oryza sativa) [ GR_tax:013681 ] |
Germplasm | |
Description | |
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | RG101 |
DNA Treatment | PstI-digested |
Source Type | Genomic |
Source Tissue | leaf |
Source Treatment | |
Vector | pUC8 |
Vector Antibiotic Resistance | Ampicillin |
Fragment Size | 1.2 |
Vector Excision Enzyme | PstI |
Vector Primers | M13 forward/M13 reverse |
Overgo1 | |
Overgo2 |
Gramene Literature | McCouch-S-R, Kochert-G, Yu-Z-H, Wang-Z-Y, Khush-G-S, Coffman-W-R, Tanksley-S-D, "Molecular mapping of rice chromosomes", Theoretical and applied genetics, 1988, vol. 76, pp. 815-829 |
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Gramene Diversity Rice Marker | 715 |
Gramene Diversity Rice Marker | 1198 |
CCAAAAAAAAAAGAGAGGGATTTCTTGTTCATCCTGAGGCAACTGAAAATTTGCTACATTTCAGTCACTGTCACTCCACA
CTTTTTCTTTATAAAACAATCCCTCCTTTGACAAAAGGTTGAATGAAGAATTATCTAAGCTAAACATAAAACGAACCAGT
TGGGCAGTGTTATTTGAAGTAAATTTGCATGTTCTACACCACTCTTCCTCTCCTTTTTTAAAATAAAACTGTTTCTTATA
CATCTGTGGCTATCGATCTATACTATATAATGTTCCACTTTGATGGATAGCATAGATATTTCTTTTTTATTTCATTTAAC
ATAATAATTTCNAAGCCTTGAGAATGAATATGATGGCTCCTTTTAGTCATGTTTGTACTGTTCAATTTCAAACTTAGACC
ACTTCTTTTTAAAAAAAATATATAAGTGNCCTAAATANGTAAGNNAATGGNACATTATTAAGGGGCNAGGCTCCNCAATA
TAACCANACAGNTCATCACCAAACCANCGGCCANANATGGGGGGGCAAGCAGGATCGGCAGGGGGGNAGGNCGGCCATCC
AATTTAAGGGGNCNAAAGGGNGCCCCCTCNAAAACACCTGGCAAGGTGGGGGGGGG
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 1 | 30,065,560-30,066,027 bp | View Comparative Map | |||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | IGCN 1998 | BNL6.32 | 1 | 112.2-112.2 cM | View Comparative Map | |||
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KRGRP 1998 | BNL6.32 | 1 | 162.4-162.4 cM | View Comparative Map | ||||
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QTL | CNHZAU Zh97/Ming63 RI QTL 2002 | BNL6.32 | 1 | 186-186 cM | View Comparative Map | |||
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CNRRI Zh97B/Mil46 RI QTL 2002 | BNL6.32 | 1 | 139.4-139.4 cM | View Comparative Map | ||||
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CNYU Naj11/Bal DH QTL 1999 | BNL6.32 | 1 | 72.3-72.3 cM | View Comparative Map | ||||
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IGCAS ZYQ8/JX17 DH QTL 2000 | BNL6.32 | 1 | 136.6-136.6 cM | View Comparative Map | ||||
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IGCAS ZYQ8/JX17 F2 QTL 1995 | BNL6.32 | 1 | 0-0 cM | View Comparative Map | ||||
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IGCN ZYQ18/JX17 DH QTL 1998 | BNL6.32 | 1 | 112.2-112.2 cM | View Comparative Map | ||||
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IRRI IR622/IR600 QTL 2003 | BNL6.32 | 1 | 193.8-193.8 cM | View Comparative Map | ||||
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IRRI Mor/CO39 QTL 1994 | BNL6.32 | 1 | 57.4-57.4 cM | View Comparative Map | ||||
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KRGRP Mil23/Gih QTL 1998 | BNL6.32 | 1 | 162.4-162.4 cM | View Comparative Map | ||||
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UCD Lab/Bla QTL 1998 | BNL6.32 | 1 | 150-150 cM | View Comparative Map | ||||
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Zh97/Ming63 CNHZAU F2 QTL 1999 | BNL6.32 | 1 | 10.5-10.5 cM | View Comparative Map | ||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Genetic | Huazhong RFLP 1997 | BNL6.32 | 1 | 137.5-137.5 cM | View Comparative Map | |||
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RG101 78-79 Autorad: Survey blot of the probe RG101 for the 78-79 population |