ID | 11456 |
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Name | RM38 |
Synonyms (1) | GA344 |
Type | SSR |
Species | Oryza sativa Indica Group (Oryza sativa indica) [ GR_tax:013682 ] |
Germplasm | |
Description | |
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | RM38 |
Repeat Motif | (GA)16 |
Anneal Temperature | 55 |
Expected PCR Product Size | 250 |
Sequence Source | AF343851 |
Linkage Group | |
Remarks |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 8 | 2,114,843-2,114,959 bp | View Comparative Map | |||
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BNL6.32 | Chr. 8 | 2,114,843-2,115,100 bp | View Comparative Map | |||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Cornell SSR 2001 | BNL6.32 | 8 | 28-28 cM | View Comparative Map | |||
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IRMI 2003 | BNL6.32 | 8 | 16.4-16.4 cM | View Comparative Map | ||||
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KRGRP 1998 | BNL6.32 | 8 | 3.9-3.9 cM | View Comparative Map | ||||
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QTL | Brazil BG90-2/RS16 QTL 2002 | BNL6.32 | 8 | 33.1-33.1 cM | View Comparative Map | |||
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CNHAU Zhenshan 97/IRAT109 SSR QTL 2006 | BNL6.32 | 8 | 12.2-12.2 cM | View Comparative Map | ||||
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CNHZAU Zhe97/Wuy2 QTL 2004 | BNL6.32 | 8 | 17.5-17.5 cM | View Comparative Map | ||||
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Cornell IR64/Azu DH QTL 2001 | BNL6.32 | 8 | 28-28 cM | View Comparative Map | ||||
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INDIR IR58025/O. rufipogon BC SSR QTL 2005 | BNL6.32 | 8 | 0-0 cM | View Comparative Map | ||||
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IRRI RD23/Olong F2 QTL 2003 | BNL6.32 | 8 | 9-9 cM | View Comparative Map | ||||
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JUT Akihi/IRAT109 QTL 2004 | BNL6.32 | 8 | 21.08-21.08 cM | View Comparative Map | ||||
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JUT IR36/Genj QTL 2004 | BNL6.32 | 8 | 0-0 cM | View Comparative Map | ||||
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KRGRP Mil23/Gih QTL 1998 | BNL6.32 | 8 | 3.9-3.9 cM | View Comparative Map | ||||
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NDSU EM93/SS18 BC QTL 2004 | BNL6.32 | 8 | 16.8-16.8 cM | View Comparative Map | ||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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QTL | USMSU O sativa CL16/O.nivara 80470 SSR QTL 2006 | BNL6.32 | 8 | 16.4-16.4 cM | View Comparative Map | |||
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Species | Type | Name | Assoc. Type |
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Oryza sativa | QTL | AQA005 | qtl_marker |
Oryza sativa | QTL | AQA009 | qtl_marker |
Oryza sativa | QTL | AQDD002 | qtl_marker |
Oryza sativa | QTL | AQE078 | qtl_marker |
Oryza sativa | QTL | AQEI014 | qtl_marker |
Oryza sativa | QTL | AQEI077 | qtl_marker |
Oryza sativa | QTL | AQEI081 | qtl_marker |
Oryza sativa | QTL | AQEI093 | qtl_marker |
Oryza sativa | QTL | AQEI125 | qtl_marker |
Oryza sativa | QTL | AQFJ005 | qtl_marker |
Oryza sativa | QTL | AQFJ015 | qtl_marker |
Oryza sativa | QTL | AQFJ033 | qtl_marker |
Oryza sativa | QTL | AQFJ047 | qtl_marker |
Oryza sativa | QTL | AQGP031 | qtl_marker |
Oryza sativa | QTL | AQGP065 | qtl_marker |
Oryza sativa | QTL | AQGS037 | qtl_marker |
Oryza sativa | QTL | AQGS069 | qtl_marker |
Oryza sativa Japonica Group | SSR | AUT22334 | equivalent_to |
Oryza sativa | QTL | CQAP1 | qtl_marker |
Oryza sativa Indica Group | Primer | RM38_forward | primer_forward |
Oryza sativa Indica Group | Primer | RM38_reverse | primer_reverse |
Oryza sativa Indica Group | Genomic DNA | AF343851 | contained_in_sequence |
Oryza sativa Indica Group | Genomic DNA | AF343851 | source_sequence |
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