ID | 11409 |
---|---|
Name | RM478 |
Synonyms (0) | None. |
Type | SSR |
Species | Oryza sativa Japonica Group (Oryza sativa japonica) [ GR_tax:013684 ] |
Germplasm | |
Description | |
Tags () | None |
Marker Created: | |
---|---|
Marker Updated: | |
Internal Marker Accession: | RM478 |
Repeat Motif | (AG)12 |
Anneal Temperature | 55 |
Expected PCR Product Size | 205 |
Sequence Source | AQ363764 |
Linkage Group | |
Remarks |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 7 | 25,949,521-25,949,725 bp | View Comparative Map | |||
|
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Genetic | Cornell SSR 2001 | BNL6.32 | 7 | 93.8-93.8 cM | View Comparative Map | |||
|
||||||||
IRMI 2003 | BNL6.32 | 7 | 96.1-96.1 cM | View Comparative Map | ||||
|
||||||||
QTL | CNHAU Zhen97/ H94 QTL 2005 | BNL6.32 | 7 | 58.6-58.6 cM | View Comparative Map | |||
|
||||||||
CNHAU Zhenshan 97/IRAT109 SSR QTL 2006 | BNL6.32 | 7 | 103.8-103.8 cM | View Comparative Map | ||||
|
||||||||
Cornell IR64/Azu DH QTL 2001 | BNL6.32 | 7 | 93.8-93.8 cM | View Comparative Map | ||||
|
Species | Type | Name | Assoc. Type |
---|---|---|---|
Oryza sativa | QTL | AQGM004 | qtl_marker |
Oryza sativa | QTL | AQGP085 | qtl_marker |
Oryza sativa Japonica Group | Primer | RM478_forward | primer_forward |
Oryza sativa Japonica Group | Primer | RM478_reverse | primer_reverse |
Oryza sativa Japonica Group | GSS | AQ363764 | contained_in_sequence |
Oryza sativa Japonica Group | GSS | AQ363764 | source_sequence |