ID | 11192 |
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Name | RM545 |
Synonyms (0) | None. |
Type | SSR |
Species | Oryza sativa Japonica Group (Oryza sativa japonica) [ GR_tax:013684 ] |
Germplasm | |
Description | |
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | RM545 |
Repeat Motif | (GA)30 |
Anneal Temperature | 55 |
Expected PCR Product Size | 226 |
Sequence Source | AQ864658 |
Linkage Group | |
Remarks |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 3 | 4,947,911-4,948,136 bp | View Comparative Map | |||
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BNL6.32 | Chr. 3 | 4,947,945-4,948,110 bp | View Comparative Map | |||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Genetic | Cornell SSR 2001 | BNL6.32 | 3 | 35.3-35.3 cM | View Comparative Map | |||
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IRMI 2003 | BNL6.32 | 3 | 24.7-24.7 cM | View Comparative Map | ||||
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QTL | Cornell IR64/Azu DH QTL 2001 | BNL6.32 | 3 | 35.3-35.3 cM | View Comparative Map | |||
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Cornell IR64/IRG105 QTL 2003 | BNL6.32 | 3 | 41.4-41.4 cM | View Comparative Map | ||||
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NDSU EM93/SS18 BC QTL 2004 | BNL6.32 | 3 | 49.4-49.4 cM | View Comparative Map | ||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
QTL | USMSU O sativa CL16/O.nivara 80470 SSR QTL 2006 | BNL6.32 | 3 | 24.7-24.7 cM | View Comparative Map | |||
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Species | Type | Name | Assoc. Type |
---|---|---|---|
Oryza sativa | QTL | AQEE021 | qtl_marker |
Oryza sativa | QTL | AQJ001 | qtl_marker |
Oryza sativa Japonica Group | SSR | AUT14523 | equivalent_to |
Oryza sativa | QTL | EQC0010 | qtl_marker |
Oryza sativa | QTL | EQC0011 | qtl_marker |
Oryza sativa Japonica Group | Primer | RM545_forward | primer_forward |
Oryza sativa Japonica Group | Primer | RM545_reverse | primer_reverse |
Oryza sativa Japonica Group | GSS | AQ864658 | contained_in_sequence |
Oryza sativa Japonica Group | GSS | AQ864658 | source_sequence |