ID | 11127 |
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Name | RM300 |
Synonyms (1) | GTT711 |
Type | SSR |
Species | Oryza sativa Indica Group (Oryza sativa indica) [ GR_tax:013682 ] |
Germplasm | |
Description | |
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | RM300 |
Repeat Motif | (GTT)14 |
Anneal Temperature | 55 |
Expected PCR Product Size | 121 |
Sequence Source | AF344125 |
Linkage Group | |
Remarks |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 2 | 13,191,380-13,191,541 bp | View Comparative Map | |||
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BNL6.32 | Chr. 2 | 13,191,382-13,191,545 bp | View Comparative Map | |||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Genetic | Cornell SSR 2001 | BNL6.32 | 2 | 66-68.9 cM | View Comparative Map | |||
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IRMI 2003 | BNL6.32 | 2 | 54.6-54.6 cM | View Comparative Map | ||||
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QTL | CNYU Bal/Nan//Bal BC1 QTL 2001 | BNL6.32 | 2 | 91.22-91.22 cM | View Comparative Map | |||
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Cornell IR64/Azu DH QTL 2001 | BNL6.32 | 2 | 67.45-67.45 cM | View Comparative Map | ||||
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Cornell Jef/Oruf BC QTL 2003 | BNL6.32 | 2 | 55-55 cM | View Comparative Map | ||||
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IRRI RD23/Olong F2 QTL 2003 | BNL6.32 | 2 | 73.4-73.4 cM | View Comparative Map | ||||
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Species | Type | Name | Assoc. Type |
---|---|---|---|
Oryza sativa | QTL | AQAM036 | qtl_marker |
Oryza sativa | QTL | AQAM037 | qtl_marker |
Oryza sativa | QTL | AQAM040 | qtl_marker |
Oryza sativa | QTL | AQFE027 | qtl_marker |
Oryza sativa | QTL | AQFE041 | qtl_marker |
Oryza sativa | QTL | AQFE085 | qtl_marker |
Oryza sativa Japonica Group | SSR | AUT13097 | equivalent_to |
Oryza sativa Indica Group | Primer | RM300_forward | primer_forward |
Oryza sativa Indica Group | Primer | RM300_reverse | primer_reverse |
Oryza sativa Indica Group | Genomic DNA | AF344125 | contained_in_sequence |
Oryza sativa Indica Group | Genomic DNA | AF344125 | source_sequence |
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