ID | 11110 |
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Name | RM243 |
Synonyms (1) | CT441 |
Type | SSR |
Species | Oryza sativa Indica Group (Oryza sativa indica) [ GR_tax:013682 ] |
Germplasm | |
Description | |
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | RM243 |
Repeat Motif | (CT)18 |
Anneal Temperature | 55 |
Expected PCR Product Size | 116 |
Sequence Source | AF344063 |
Linkage Group | |
Remarks |
Gramene Literature | Chen-X, Temnykh-S, Xu-Y, Cho-Y-G, McCouch-S-R, "Development of a microsatellite framework map providing genome-wide coverage in rice (Oryza sativa L.)", Theoretical and applied genetics, 1997, vol. 95, pp. 553-567 |
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Gramene Diversity Rice Marker | 179 |
Gramene Diversity Rice Marker | 1249 |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 1 | 7,970,722-7,970,836 bp | View Comparative Map | |||
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BNL6.32 | Chr. 1 | 7,970,728-7,970,839 bp | View Comparative Map | |||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Cornell SSR 2001 | BNL6.32 | 1 | 57.3-57.3 cM | View Comparative Map | |||
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IGCN 1998 | BNL6.32 | 1 | 230.5-230.5 cM | View Comparative Map | ||||
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KRGRP 1998 | BNL6.32 | 1 | 44-44 cM | View Comparative Map | ||||
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QTL | Brazil BG90-2/RS16 QTL 2002 | BNL6.32 | 1 | 76.1-76.1 cM | View Comparative Map | |||
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CAU IRAT109/YUEFU QTL 2004 | BNL6.32 | 1a | 0-0 cM | View Comparative Map | ||||
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CNHAU Zhen97/ H94 QTL 2005 | BNL6.32 | 1 | 63.8-63.8 cM | View Comparative Map | ||||
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CNHAU Zhenshan 97/IRAT109 SSR QTL 2006 | BNL6.32 | 1 | 49-49 cM | View Comparative Map | ||||
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CNHZAU Zh97/Ming63 RI QTL 2002 | BNL6.32 | 1 | 57.3-57.3 cM | View Comparative Map | ||||
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Cornell IR64/Azu DH QTL 2001 | BNL6.32 | 1 | 57.3-57.3 cM | View Comparative Map | ||||
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Cornell Jef/Oruf BC QTL 2003 | BNL6.32 | 1 | 46.4-46.4 cM | View Comparative Map | ||||
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IGCAS ZYQ8/JX17 DH QTL 2000 | BNL6.32 | 1 | 58.7-58.7 cM | View Comparative Map | ||||
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IGCN ZYQ18/JX17 DH QTL 1998 | BNL6.32 | 1 | 230.5-230.5 cM | View Comparative Map | ||||
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INDIR IR58025/O. rufipogon BC SSR QTL 2005 | BNL6.32 | 1 | 98.1-98.1 cM | View Comparative Map | ||||
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IRRI IR622/IR600 QTL 2003 | BNL6.32 | 1 | 127.6-127.6 cM | View Comparative Map | ||||
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JUT Akihi/IRAT109 QTL 2004 | BNL6.32 | 1 | 26.54-26.54 cM | View Comparative Map | ||||
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JUT IR36/Genj QTL 2004 | BNL6.32 | 1 | 56.8-56.8 cM | View Comparative Map | ||||
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JUT Patnai/Goai F2 QTL 2004 | BNL6.32 | 1 | 50.3-50.3 cM | View Comparative Map | ||||
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KRGRP Mil23/Gih QTL 1998 | BNL6.32 | 1 | 44-44 cM | View Comparative Map | ||||
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M202/IR50 UCD QTL 2003 | BNL6.32 | 1 | 28.2-28.2 cM | View Comparative Map | ||||
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TKU Integrated QTL 2002 | BNL6.32 | 1 | 30.7-30.7 cM | View Comparative Map | ||||
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TTU IR64/Orufi RI QTL 2003 | BNL6.32 | 1b | 83.5-83.5 cM | View Comparative Map | ||||
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