ID | 11058 | ||
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Name | RM151 | ||
Synonyms (2) |
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Type | SSR | ||
Species | Oryza sativa (Oryza sativa) [ GR_tax:013681 ] | ||
Germplasm | |||
Description | |||
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | RM151 |
Repeat Motif | (TA)23 |
Anneal Temperature | 55 |
Expected PCR Product Size | 197 |
Sequence Source | |
Linkage Group | |
Remarks |
TCTTTAATACCTCTCCTCCTCCTGTTGCTGCTTCTGCCTCTCTCACATCTTCTTTCTTTCCTTCTCTGGATCTCTTCCAT
CTTCAGAAGAGAGAGCACTAGTTAGCATACCCATCCATGATGAACATGATGACCGATCTGAGCTGCGGGCCATCGTCGAT
GACGGAGCTGACCGCGGCAGGCGCCGGCTGGGTCAGGATCGTCGGCGGCGGTGGCGGCGGGGAGCAGCGAGAAGATGGGG
AGGGGGAAGATCGAGATAAAGCGGATCGAGAACACGACGAACCGGCAGGTGACCTTCTGCAAGCGCCGCAATGGCCTCCT
GAAGAAGGCGTACGAGCTGTCCGTCCTCTGCGACGCCGAGGTTGCCCTCATCGTCTTCTCCAGCCGCGGGCGCCTCTACG
AGTACGCCAACAACAGTGTGAAATCCACCGTTGAGAGGTACAAGAAGGCAAACAGTGACACCTCCAACTCTGGCACAGTT
GCAGAAGTCAATGCCCAGCACTACCAGCAGGAGTCCTCCAAACTGCGCCAACAAATCAGTAGCTTACAGAACGCAAACAG
TAGGACCATAGTGGGGGATTCTATCAACACCATGAGCCTCAGGGACCTTAAACAGGTAGAGAACAGGCTGGAGAAAGGCA
TAGCTAAGATAAGGGCTAGAAAGAATGAGCTGTTATATGCTGAAGTTGAGTACATGCAGAAAAGGGAAGTTGAGCTGCAG
AATGACAACATGTACCTGAGGAGCAAGGTTGTTGAGAATGAGAGGGGACAGCAGCCACTGAACATGATGGGGGCAGCATC
AACAAGTGAATACGATCATATGGTTAATAACCCATATGATTCCAGGAACTTTCTTCAAGTGAACATCATGCAGCAGCCTC
AGCATTACGCCCATCAGCTGCAGCCAACTACCCTTCAACTCGGGCAGCAGCCGGCCTTCAATTAGTTTTGGTGTAGACAC
CGTACGTACACACATGAAATCTGAAGGCGTCGATACCCGCGGCTACGTAACAGCGTGATCAACCTGAAGAAATCGATGCA
GTAATTCTATGTGTTCGTCAGATCATCATAACCAGTATTGTCATTAGGCGTTGTGAAAAAAAAATGTGTCAGCATGCATT
GCAAGCTAGCGTTTGTGGCTGCTCATCAGCTGCATGCGTAATTGCGTACGTGCACAAATTAAACAGACCTTGCTACCATT
GTGCCATATTGTGTGTGTTGTATGATATATATATATATATATATATATATATATATATATATATATATATAAACAGCACG
TTTGTGCTCTGATTCGTGTAACTGATCAGCAGATCAAACTCTACCACTGCCGATATATATGTGAGGACCATGGATTGATG
C
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 1 | 5,558,576-5,558,814 bp | View Comparative Map | |||
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BNL6.32 | Chr. 1 | 5,558,598-5,558,787 bp | View Comparative Map | |||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Cornell SSR 2001 | BNL6.32 | 1 | 36.2-36.2 cM | View Comparative Map | |||
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IRMI 2003 | BNL6.32 | 1 | 28.4-28.4 cM | View Comparative Map | ||||
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QTL | CNHAU Zhen97/ H94 QTL 2005 | BNL6.32 | 1 | 46.6-46.6 cM | View Comparative Map | |||
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CNRRI XeiB/Mil46 RI QTL 2002 | BNL6.32 | 1 | 46.6-46.6 cM | View Comparative Map | ||||
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CNRRI Zh97B/Mil46 RI QTL 2002 | BNL6.32 | 1 | 32.8-32.8 cM | View Comparative Map | ||||
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Cornell IR64/Azu DH QTL 2001 | BNL6.32 | 1 | 36.2-36.2 cM | View Comparative Map | ||||
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JUT IR36/Genj QTL 2004 | BNL6.32 | 1 | 26.6-26.6 cM | View Comparative Map | ||||
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M202/IR50 UCD QTL 2003 | BNL6.32 | 1 | 12.3-12.3 cM | View Comparative Map | ||||
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Species | Type | Name | Assoc. Type |
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Oryza sativa | QTL | AQAJ001 | qtl_marker |
Oryza sativa | QTL | AQAK001 | qtl_marker |
Oryza sativa | QTL | AQAK008 | qtl_marker |
Oryza sativa | QTL | AQAK016 | qtl_marker |
Oryza sativa | QTL | AQAK024 | qtl_marker |
Oryza sativa | QTL | AQAV003 | qtl_marker |
Oryza sativa | QTL | AQCF001 | qtl_marker |
Oryza sativa | QTL | AQCF002 | qtl_marker |
Oryza sativa | QTL | AQCF015 | qtl_marker |
Oryza sativa | QTL | AQCF016 | qtl_marker |
Oryza sativa | QTL | AQCF027 | qtl_marker |
Oryza sativa | QTL | AQCF028 | qtl_marker |
Oryza sativa | QTL | AQCF029 | qtl_marker |
Oryza sativa | QTL | AQCG001 | qtl_marker |
Oryza sativa | QTL | AQEJ001 | qtl_marker |
Oryza sativa | QTL | AQEJ002 | qtl_marker |
Oryza sativa | QTL | AQEJ003 | qtl_marker |
Oryza sativa | QTL | AQEJ004 | qtl_marker |
Oryza sativa Japonica Group | SSR | AUT10335 | equivalent_to |
Oryza sativa | mRNA | L37528 | contained_in_sequence |