ID | 10754 |
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Name | RM546 |
Synonyms (0) | None. |
Type | SSR |
Species | Oryza sativa Japonica Group (Oryza sativa japonica) [ GR_tax:013684 ] |
Germplasm | |
Description | |
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | RM546 |
Repeat Motif | (CCT)7 |
Anneal Temperature | 55 |
Expected PCR Product Size | 268 |
Sequence Source | AQ865960 |
Linkage Group | |
Remarks |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 3 | 6,163,117-6,163,384 bp | View Comparative Map | |||
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BNL6.32 | Chr. 3 | 6,163,260-6,163,387 bp | View Comparative Map | |||||
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BNL6.32 | Chr. 3 | 6,163,260-6,163,387 bp | View Comparative Map | |||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Genetic | CIAT SSR 2006 | BNL6.32 | 3 | 30.3-30.3 cM | View Comparative Map | |||
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Cornell SSR 2001 | BNL6.32 | 3 | 46.4-46.4 cM | View Comparative Map | ||||
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QTL | Cornell IR64/Azu DH QTL 2001 | BNL6.32 | 3 | 46.4-46.4 cM | View Comparative Map | |||
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Species | Type | Name | Assoc. Type |
---|---|---|---|
Oryza sativa Japonica Group | SSR | AUT14600 | equivalent_to |
Oryza sativa Japonica Group | SSR | AUT14601 | equivalent_to |
Oryza sativa Japonica Group | Primer | RM546_forward | primer_forward |
Oryza sativa Japonica Group | Primer | RM546_reverse | primer_reverse |
Oryza sativa Japonica Group | GSS | AQ865960 | contained_in_sequence |
Oryza sativa Japonica Group | GSS | AQ865960 | source_sequence |