ID | 10712 |
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Name | RM174 |
Synonyms (0) | None. |
Type | SSR |
Species | Oryza sativa Japonica Group (Oryza sativa japonica) [ GR_tax:013684 ] |
Germplasm | |
Description | |
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | RM174 |
Repeat Motif | (AGG)7(GA)10 |
Anneal Temperature | 67 |
Expected PCR Product Size | 208 |
Sequence Source | D48756 |
Linkage Group | |
Remarks |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 2 | 7,006,085-7,006,352 bp | View Comparative Map | |||
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BNL6.32 | Chr. 2 | 7,006,085-7,006,352 bp | View Comparative Map | |||||
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BNL6.32 | Chr. 2 | 7,006,088-7,006,296 bp | View Comparative Map | |||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Genetic | CIAT SSR 2006 | BNL6.32 | 2 | 33.8-33.8 cM | View Comparative Map | |||
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Cornell SSR 2001 | BNL6.32 | 2 | 47.5-47.5 cM | View Comparative Map | ||||
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IRMI 2003 | BNL6.32 | 2 | 33.6-33.6 cM | View Comparative Map | ||||
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QTL | Cornell IR64/Azu DH QTL 2001 | BNL6.32 | 2 | 47.5-47.5 cM | View Comparative Map | |||
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Cornell Jef/Oruf BC QTL 2003 | BNL6.32 | 2 | 31.5-31.5 cM | View Comparative Map | ||||
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IRRI RD23/Olong F2 QTL 2003 | BNL6.32 | 2 | 46.9-46.9 cM | View Comparative Map | ||||
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LSU Caiapo/IRGC103544 QTL 2004 | BNL6.32 | 2 | 33-33 cM | View Comparative Map | ||||
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M202/IR50 UCD QTL 2003 | BNL6.32 | 2 | 41.4-41.4 cM | View Comparative Map | ||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Genetic | Cornell RFLP 2001 | BNL6.32 | 2 | 51.2-51.2 cM | View Comparative Map | |||
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Species | Type | Name | Assoc. Type |
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Oryza sativa | QTL | AQFU009 | qtl_marker |
Oryza sativa Japonica Group | SSR | AUT12743 | equivalent_to |
Oryza sativa Japonica Group | SSR | AUT12744 | equivalent_to |
Oryza sativa Japonica Group | Primer | RM174_forward | primer_forward |
Oryza sativa Japonica Group | Primer | RM174_reverse | primer_reverse |
Oryza sativa Japonica Group | EST | D48756 | contained_in_sequence |
Oryza sativa Japonica Group | EST | D48756 | source_sequence |
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