ID | 10689 |
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Name | RM301 |
Synonyms (1) | GT1 |
Type | SSR |
Species | Oryza sativa Indica Group (Oryza sativa indica) [ GR_tax:013682 ] |
Germplasm | |
Description | |
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | RM301 |
Repeat Motif | (GT)5G2(GT)8T2(GT)3 |
Anneal Temperature | 55 |
Expected PCR Product Size | 153 |
Sequence Source | AF344126 |
Linkage Group | |
Remarks |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 2 | 12,216,463-12,216,613 bp | View Comparative Map | |||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Genetic | CIAT SSR 2006 | BNL6.32 | 2 | 59.3-59.3 cM | View Comparative Map | |||
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Cornell SSR 2001 | BNL6.32 | 2 | 66-68.9 cM | View Comparative Map | ||||
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IRMI 2003 | BNL6.32 | 2 | 53.5-53.5 cM | View Comparative Map | ||||
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QTL | CNHAU Zhen97/ H94 QTL 2005 | BNL6.32 | 2 | 35.4-35.4 cM | View Comparative Map | |||
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CNHZAU Zhe97/Wuy2 QTL 2004 | BNL6.32 | 2 | 100.8-100.8 cM | View Comparative Map | ||||
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Cornell IR64/Azu DH QTL 2001 | BNL6.32 | 2 | 67.45-67.45 cM | View Comparative Map | ||||
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Cornell Jef/Oruf BC QTL 2003 | BNL6.32 | 2 | 50.6-50.6 cM | View Comparative Map | ||||
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LSU Caiapo/IRGC103544 QTL 2004 | BNL6.32 | 2 | 56.3-56.3 cM | View Comparative Map | ||||
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M202/IR50 UCD QTL 2003 | BNL6.32 | 2 | 54.7-54.7 cM | View Comparative Map | ||||
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Species | Type | Name | Assoc. Type |
---|---|---|---|
Oryza sativa | QTL | AQAV001 | qtl_marker |
Oryza sativa | QTL | AQAV004 | qtl_marker |
Oryza sativa | QTL | AQEI002 | qtl_marker |
Oryza sativa | QTL | AQEI047 | qtl_marker |
Oryza sativa | QTL | AQEI048 | qtl_marker |
Oryza sativa | QTL | AQEI049 | qtl_marker |
Oryza sativa Indica Group | Primer | RM301_forward | primer_forward |
Oryza sativa Indica Group | Primer | RM301_reverse | primer_reverse |
Oryza sativa Indica Group | Genomic DNA | AF344126 | contained_in_sequence |
Oryza sativa Indica Group | Genomic DNA | AF344126 | source_sequence |
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