ID | 10665 |
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Name | RM129 |
Synonyms (0) | None. |
Type | SSR |
Species | Oryza sativa Japonica Group (Oryza sativa japonica) [ GR_tax:013684 ] |
Germplasm | |
Description | |
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | RM129 |
Repeat Motif | (CGG)8 |
Anneal Temperature | 55 |
Expected PCR Product Size | 205 |
Sequence Source | D40184 |
Linkage Group | |
Remarks |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 1 | 19,008,692-19,008,853 bp | View Comparative Map | |||
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BNL6.32 | Chr. 1 | 19,008,716-19,008,920 bp | View Comparative Map | |||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | CIAT SSR 2006 | BNL6.32 | 1 | 93-93 cM | View Comparative Map | |||
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Cornell SSR 2001 | BNL6.32 | 1 | 78.4-83.5 cM | View Comparative Map | ||||
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QTL | CNHAU Zhenshan 97/IRAT109 SSR QTL 2006 | BNL6.32 | 1 | 103.9-103.9 cM | View Comparative Map | |||
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CNHZAU Zhe97/Wuy2 QTL 2004 | BNL6.32 | 1 | 85.3-85.3 cM | View Comparative Map | ||||
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CNNAU IR50/Tatsumimochi/Miyukimochi SSR QTL 2006 | BNL6.32 | 1 | 102.6-102.6 cM | View Comparative Map | ||||
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Cornell IR64/Azu DH QTL 2001 | BNL6.32 | 1 | 80.95-80.95 cM | View Comparative Map | ||||
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IRRI Lem/Teq RI QTL 2001 | BNL6.32 | 1 | 135.5-135.5 cM | View Comparative Map | ||||
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M202/IR50 UCD QTL 2003 | BNL6.32 | 7 | 25.5-25.5 cM | View Comparative Map | ||||
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TTU IR64/Orufi RI QTL 2003 | BNL6.32 | 1b | 108.8-108.8 cM | View Comparative Map | ||||
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Species | Type | Name | Assoc. Type |
---|---|---|---|
Oryza sativa | QTL | AQA044 | qtl_marker |
Oryza sativa | QTL | AQAV008 | qtl_marker |
Oryza sativa | QTL | AQCU052 | qtl_marker |
Oryza sativa | QTL | AQCU070 | qtl_marker |
Oryza sativa | QTL | AQCU114 | qtl_marker |
Oryza sativa | QTL | AQCU120 | qtl_marker |
Oryza sativa | QTL | AQCU182 | qtl_marker |
Oryza sativa | QTL | AQCU240 | qtl_marker |
Oryza sativa | QTL | AQCU252 | qtl_marker |
Oryza sativa | QTL | AQCU255 | qtl_marker |
Oryza sativa | QTL | AQFJ058 | qtl_marker |
Oryza sativa Japonica Group | SSR | AUT11053 | equivalent_to |
Oryza sativa Japonica Group | Primer | RM129_forward | primer_forward |
Oryza sativa Japonica Group | Primer | RM129_reverse | primer_reverse |
Oryza sativa Japonica Group | EST | D40184 | contained_in_sequence |
Oryza sativa Japonica Group | EST | D40184 | source_sequence |