ID | 12117 | ||
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Name | RG697 | ||
Synonyms (2) |
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Type | RFLP | ||
Species | Oryza sativa (Oryza sativa) [ GR_tax:013681 ] | ||
Germplasm | |||
Description | |||
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | RG697 |
DNA Treatment | PstI-digested |
Source Type | Genomic |
Source Tissue | leaf |
Source Treatment | |
Vector | pGEM4Z |
Vector Antibiotic Resistance | Ampicillin |
Fragment Size | 2.1 |
Vector Excision Enzyme | PstI |
Vector Primers | M13 forward/M13 reverse |
Overgo1 | |
Overgo2 |
CTTGCAAAACGAAAATAAATTATACAGTACTTCAGGCTGACCTACTGTTACATTTCTCATTTTTCACGGAGGGATTATTC
AATGTACTGTACTAGTACTAGTATTCTGCTAGGATTTCCAAGATTTGATAATTGGTGACTTTGTTCATTTTGCATAGGAG
TATGACTGTATGACAGGACCACATGACGCGATGCACTGTATTTTGAAGTGTACACGGTGACAGCATTCACGCGTTGTAGC
TGCATGGCTGCATCAGGTTCAGAGAGAAGCAGGCCGAGGCAATAATGAATGTAAGACGGCTTGTTAGTATTCTTAATCAC
ATGAATCTTTTTTTCAAACTCATTTGAGACTTGACATCCTCCAAAAGCTTATCAGAGTCCTGTTAAACACTAATTACACA
TTTGATCCCATTATTGAGAAAGGAAGCTACCATCAACCTGGCCCCTCCTAACAAAAAAAAAACATCAAGCAGGNCCATCT
TGGCAAGGGCCCCAAGGGTAATTATTCAACCCATGNAAACCAAGGAGATNTCCNCCACCATGGTTGAAGGAATGGCCATN
GGGGGCCCAAGGCCCCCTTTTGGGANGCCCCCCAATTTNCCCNTACCAAGGTCCCAACCTTGGGNNCCCAACGCATGGAA
CCTGAANGNCCCCANTNNCCNTNNAAANCCNCANNGGGTTTAAACCCTTNGGNNCCCNCTTGGGCNAAAAAGGGGGNGGG
GTTTTTTC
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 5 | 27,453,309-27,453,817 bp | View Comparative Map | |||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | IGCN 1998 | BNL6.32 | 5 | 141.4-141.4 cM | View Comparative Map | |||
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QTL | Cornell 9024/LH422 RI QTL 1996 | BNL6.32 | 5 | 97.5-97.5 cM | View Comparative Map | |||
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Cornell V20A/glab QTL 2004 | BNL6.32 | 5 | 127.2-127.2 cM | View Comparative Map | ||||
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Cornell V20A/Oruf QTL 1998 | BNL6.32 | 5 | 107.7-107.7 cM | View Comparative Map | ||||
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IGCN ZYQ18/JX17 DH QTL 1998 | BNL6.32 | 5 | 141.4-141.4 cM | View Comparative Map | ||||
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UCD Lab/Bla QTL 1998 | BNL6.32 | 5 | 128-128 cM | View Comparative Map | ||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Cornell RFLP 1994 | BNL6.32 | 5 | 121.3-121.3 cM | View Comparative Map | |||
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Cornell RFLP 2001 | BNL6.32 | 5 | 102.1-102.1 cM | View Comparative Map | ||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Huazhong RFLP 1997 | BNL6.32 | 5 | 138.2-138.2 cM | View Comparative Map | |||
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BNL6.32 | 5 | 139.6-139.6 cM | View Comparative Map | |||||
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Species | Type | Name | Assoc. Type |
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Oryza sativa | QTL | AQBS003 | qtl_marker |
Oryza sativa | QTL | AQBS011 | qtl_marker |
Oryza sativa | QTL | AQBS044 | qtl_marker |
Oryza sativa | QTL | AQBS051 | qtl_marker |
Oryza sativa | QTL | AQBS065 | qtl_marker |
Oryza sativa | QTL | AQEP005 | qtl_marker |
Oryza sativa | QTL | AQEP016 | qtl_marker |
Oryza sativa | QTL | CQAS53 | qtl_marker |
Oryza sativa | QTL | CQAS54 | qtl_marker |
Oryza sativa | QTL | CQAS57 | qtl_marker |
Oryza sativa | QTL | CQAS62 | qtl_marker |
Oryza sativa | QTL | CQAS63 | qtl_marker |
Oryza sativa Indica Group | GSS | AQ074148 | related_sequence |
RG697 SL Autorad: Survey blot of the probe RG697 for the BS125/2/BS125/WLO2 population |