ID | 10965 |
---|---|
Name | RM467 |
Synonyms (0) | None. |
Type | SSR |
Species | Oryza sativa Japonica Group (Oryza sativa japonica) [ GR_tax:013684 ] |
Germplasm | |
Description | |
Tags () | None |
Marker Created: | |
---|---|
Marker Updated: | |
Internal Marker Accession: | RM467 |
Repeat Motif | (TC)21 |
Anneal Temperature | 55 |
Expected PCR Product Size | 221 |
Sequence Source | AQ329023 |
Linkage Group | |
Remarks |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 10 | 13,488,471-13,488,769 bp | View Comparative Map | |||
|
||||||||
BNL6.32 | Chr. 10 | 13,488,583-13,488,803 bp | View Comparative Map | |||||
|
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Genetic | CIAT SSR 2006 | BNL6.32 | 10 | 64.9-64.9 cM | View Comparative Map | |||
|
||||||||
Cornell SSR 2001 | BNL6.32 | 10 | 46.8-46.8 cM | View Comparative Map | ||||
|
||||||||
QTL | CNHAU Zhen97/ H94 QTL 2005 | BNL6.32 | 10 | 22.9-22.9 cM | View Comparative Map | |||
|
||||||||
CNHAU Zhenshan 97/IRAT109 SSR QTL 2006 | BNL6.32 | 10 | 24.8-24.8 cM | View Comparative Map | ||||
|
||||||||
Cornell IR64/Azu DH QTL 2001 | BNL6.32 | 10 | 46.8-46.8 cM | View Comparative Map | ||||
|
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
QTL | USMSU O sativa CL16/O.nivara 80470 SSR QTL 2006 | BNL6.32 | 10 | 26.1-26.1 cM | View Comparative Map | |||
|
Species | Type | Name | Assoc. Type |
---|---|---|---|
Oryza sativa | QTL | AQGA040 | qtl_marker |
Oryza sativa | QTL | AQGP005 | qtl_marker |
Oryza sativa | QTL | AQHF005 | qtl_marker |
Oryza sativa | QTL | AQHF013 | qtl_marker |
Oryza sativa | QTL | AQJ010 | qtl_marker |
Oryza sativa Japonica Group | SSR | AUT25369 | equivalent_to |
Oryza sativa | QTL | CQAE13 | qtl_marker |
Oryza sativa Japonica Group | Primer | RM467_forward | primer_forward |
Oryza sativa Japonica Group | Primer | RM467_reverse | primer_reverse |
Oryza sativa Japonica Group | GSS | AQ329023 | contained_in_sequence |
Oryza sativa Japonica Group | GSS | AQ329023 | source_sequence |