ID | 10642 |
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Name | RM272 |
Synonyms (1) | CT697 |
Type | SSR |
Species | Oryza sativa Indica Group (Oryza sativa indica) [ GR_tax:013682 ] |
Germplasm | |
Description | |
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | RM272 |
Repeat Motif | (GA)9 |
Anneal Temperature | 55 |
Expected PCR Product Size | 119 |
Sequence Source | AF344098 |
Linkage Group | |
Remarks |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 1 | 5,941,464-5,941,581 bp | View Comparative Map | |||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Genetic | CIAT SSR 2006 | BNL6.32 | 1 | 28.7-28.7 cM | View Comparative Map | |||
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Cornell SSR 2001 | BNL6.32 | 1 | 37.3-37.3 cM | View Comparative Map | ||||
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IRMI 2003 | BNL6.32 | 1 | 29.7-29.7 cM | View Comparative Map | ||||
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QTL | Cornell IR64/Azu DH QTL 2001 | BNL6.32 | 1 | 37.3-37.3 cM | View Comparative Map | |||
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Cornell Jef/Oruf BC QTL 2003 | BNL6.32 | 1 | 26.4-26.4 cM | View Comparative Map | ||||
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INDIR IR58025/O. rufipogon BC SSR QTL 2005 | BNL6.32 | 1 | 48.8-48.8 cM | View Comparative Map | ||||
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IRRI RD23/Olong F2 QTL 2003 | BNL6.32 | 1 | 19.2-19.2 cM | View Comparative Map | ||||
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TKU Integrated QTL 2002 | BNL6.32 | 1 | 24-24 cM | View Comparative Map | ||||
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TTU IR64/Orufi RI QTL 2003 | BNL6.32 | 1b | 72.8-72.8 cM | View Comparative Map | ||||
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Species | Type | Name | Assoc. Type |
---|---|---|---|
Oryza sativa | QTL | AQFE001 | qtl_marker |
Oryza sativa | QTL | AQFE002 | qtl_marker |
Oryza sativa | QTL | AQFE003 | qtl_marker |
Oryza sativa | QTL | AQFE004 | qtl_marker |
Oryza sativa | QTL | AQFE023 | qtl_marker |
Oryza sativa | QTL | AQFE038 | qtl_marker |
Oryza sativa | QTL | AQGP014 | qtl_marker |
Oryza sativa | QTL | AQGS001 | qtl_marker |
Oryza sativa | QTL | AQGS002 | qtl_marker |
Oryza sativa | QTL | AQGS058 | qtl_marker |
Oryza sativa Indica Group | Primer | RM272_forward | primer_forward |
Oryza sativa Indica Group | Primer | RM272_reverse | primer_reverse |
Oryza sativa Indica Group | Genomic DNA | AF344098 | contained_in_sequence |
Oryza sativa Indica Group | Genomic DNA | AF344098 | source_sequence |
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