ID | 52435 |
---|---|
Name | EQC0005 (QTL ACCESSION ) |
Synonyms (1) | EQC0005-SBRNB |
Published Symbol | sbr1.1 |
TO TERM | TO:0000557 (secondary branch number) |
Trait Name | secondary branch |
Trait Symbol | SBRNB |
Type | QTL |
Species | Oryza sativa (Oryza sativa) [ GR_tax:013681 ] |
Germplasm | |
Description | The QTL for secndary branch sbr1.1 on chromosome 1 is positively correlated with other morphological traits in the F2 population derived from cultivated Oryza sativa and the annual wild species O. nivara. The gene action is partially dominant and phenotypic variance is 5.7%. |
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | EQC0005 |
Chromosome | 1 |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 1 | 40,670,383-40,670,766 bp | View Comparative Map | |||
|
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
QTL | USMSU O sativa CL16/O.nivara 80470 SSR QTL 2006 | BNL6.32 | 1 | 148-178 cM | View Comparative Map | |||
|
Species | Type | Name | Assoc. Type |
---|---|---|---|
Oryza sativa | SSR | MRG5696 | qtl_marker |
Oryza sativa Japonica Group | SSR | RM529 | qtl_marker |
Oryza sativa | SSR | MRG4921 | qtl_marker |
Oryza sativa Indica Group | SSR | RM212 | qtl_marker |
Term Type | Term Name | Term Accession | |
---|---|---|---|
Growth Stage | 06-heading stage | GRO:0007044 | Search |
Plant Structure | second order inflorescence branch | PO:0006322 | Search |
Plant Growth and Development Stage | sporophyte reproductive stage | PO:0007130 | Search |
Environment | unknown environment | EO:0007403 | Search |
Trait | secondary branch number | TO:0000557 | Search |
Taxonomy | Oryza sativa | GR_tax:013681 | Search |