ID | 50812 |
---|---|
Name | CQE51 (QTL ACCESSION ) |
Synonyms (1) | CQE51-SP |
TO TERM | TO:0000559 (plant volume) |
Trait Name | space |
Trait Symbol | SP |
Type | QTL |
Species | Oryza sativa (Oryza sativa) [ GR_tax:013681 ] |
Germplasm | |
Description | Space occupied by plant. Calculated as space=1/3 (width/2)2plant height.The means of ten replications per line were used in the data analysis. Phenotypic effect contributed by Nipponbare allele. Chromosomal locations of putative QTLs were determined by single-factor analysis (one-way ANOVA) with the general linear model procedure of QGENE. Two-way ANOVAs for epistatic interaction were also carried out with QGENE at Pd0.01 threshold. The tests were done only with marker loci linked to QTLs with a single-factor P of d0.01 to reduce the likelihood of committing a type-I error. |
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | CQE51 |
Chromosome | 7 |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 7 | 2,541,390-7,232,998 bp | View Comparative Map | |||
|
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
QTL | JRGP Nip/Kas F2 QTL 2000 | BNL6.32 | 7 | 11-26 cM | View Comparative Map | |||
|
Species | Type | Name | Assoc. Type |
---|---|---|---|
Hordeum vulgare | RFLP | B2G4 | qtl_marker |
Oryza sativa | RFLP | C1023 | qtl_marker |
Oryza sativa | RFLP | C1057 | qtl_marker |
Oryza sativa | RFLP | S14083 | qtl_marker |
Oryza sativa | RFLP | R1561 | qtl_marker |
Oryza sativa | RFLP | R565 | qtl_marker |
Oryza sativa | RFLP | S20567S | qtl_marker |
Oryza sativa | RFLP | S12540 | qtl_marker |
Oryza sativa | RFLP | R2829 | qtl_marker |
Oryza sativa | RFLP | S11633 | qtl_marker |
Oryza sativa | RFLP | S10012 | qtl_marker |
Oryza sativa | RFLP | S20268 | qtl_marker |
Oryza sativa | RFLP | L538T7 | qtl_marker |
Oryza sativa | RFLP | E50408S | qtl_marker |
Term Type | Term Name | Term Accession | |
---|---|---|---|
Plant Structure | stem | PO:0009047 | Search |
Plant Structure | whole plant | PO:0000003 | Search |
Plant Growth and Development Stage | whole plant fruit ripening complete stage | PO:0007038 | Search |
Growth Stage | A-vegetative stage | GRO:0007139 | Search |
Growth Stage | B-reproductive stage | GRO:0007140 | Search |
Environment | unknown environment | EO:0007403 | Search |
Plant Growth and Development Stage | sporophyte reproductive stage | PO:0007130 | Search |
Plant Growth and Development Stage | sporophyte vegetative stage | PO:0007134 | Search |
Trait | plant volume | TO:0000559 | Search |
Taxonomy | Oryza sativa | GR_tax:013681 | Search |