ID | 50732 |
---|---|
Name | CQY4 (QTL ACCESSION ) |
Synonyms (1) | CQY4-GERMSP |
Published Symbol | qLTG-5 |
TO TERM | TO:0000430 (germination rate) |
Trait Name | germination speed |
Trait Symbol | GERMSP |
Type | QTL |
Species | Oryza sativa (Oryza sativa) [ GR_tax:013681 ] |
Germplasm | |
Description | Trait was measured as germination rate after 4 days at 15C temperature (cold temperature). Positive allele effect contributed by Nipponbare allele. Nearest marker is R830. |
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | CQY4 |
Chromosome | 5 |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 5 | 139,187-1,117,907 bp | View Comparative Map | |||
|
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
QTL | JRGP Nip/Kas F2 QTL 2000 | BNL6.32 | 5 | 3-12 cM | View Comparative Map | |||
|
Species | Type | Name | Assoc. Type |
---|---|---|---|
Oryza sativa | RFLP | C10501S | qtl_marker |
Oryza sativa | RFLP | C2067 | qtl_marker |
Oryza sativa | RFLP | C2526 | qtl_marker |
Oryza sativa | RFLP | C263 | qtl_marker |
Oryza sativa | RFLP | C568 | qtl_marker |
Oryza sativa | RFLP | C597 | qtl_marker |
Oryza sativa | RFLP | C919 | qtl_marker |
Oryza sativa | RFLP | L865 | qtl_marker |
Oryza sativa | RFLP | RG207 | qtl_marker |
Oryza sativa | RFLP | RZ783 | qtl_marker |
Oryza sativa | RFLP | E50445S | qtl_marker |
Oryza sativa | RFLP | S14158 | qtl_marker |
Oryza sativa | RFLP | RZ390 | qtl_marker |
Oryza sativa | RFLP | S12936 | qtl_marker |
Oryza sativa | RFLP | S782 | qtl_marker |
Oryza sativa | RFLP | S2649 | qtl_marker |
Triticum aestivum | RFLP | PSR937 | qtl_marker |
Oryza sativa | RFLP | S1548 | qtl_marker |
Oryza sativa | RFLP | S2309 | qtl_marker |
Oryza sativa | RFLP | S2208 | qtl_marker |
Oryza sativa | RFLP | V82 | qtl_marker |
Oryza sativa | RFLP | E732S | qtl_marker |
Oryza sativa | RFLP | R830 | qtl_marker |
Oryza sativa | RFLP | TEL1 | qtl_marker |
Oryza sativa | RFLP | G396 | qtl_marker |
Term Type | Term Name | Term Accession | |
---|---|---|---|
Plant Structure | seed | PO:0009010 | Search |
Plant Growth and Development Stage | 0 seed germination stage | PO:0007057 | Search |
Growth Stage | 01-germination | GRO:0007043 | Search |
Environment | unknown environment | EO:0007403 | Search |
Trait | germination rate | TO:0000430 | Search |
Taxonomy | Oryza sativa | GR_tax:013681 | Search |