ID | 50705 |
---|---|
Name | CQY3 (QTL ACCESSION ) |
Synonyms (1) | CQY3-GERMSP |
Published Symbol | qLTG-4-2 |
TO TERM | TO:0000430 (germination rate) |
Trait Name | germination speed |
Trait Symbol | GERMSP |
Type | QTL |
Species | Oryza sativa (Oryza sativa) [ GR_tax:013681 ] |
Germplasm | |
Description | Trait was measured as germination rate after 4 days at 15C temperature (cold temperature). Positive allele effect contributed by Nipponbare allele. Nearest marker is C513. |
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | CQY3 |
Chromosome | 4 |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 4 | 21,145,221-22,355,854 bp | View Comparative Map | |||
|
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
QTL | JRGP Nip/Kas F2 QTL 2000 | BNL6.32 | 4 | 62.1-67.35 cM | View Comparative Map | |||
|
Species | Type | Name | Assoc. Type |
---|---|---|---|
Hordeum vulgare | RFLP | ABG356 | qtl_marker |
Oryza sativa | RFLP | C1087 | qtl_marker |
Oryza sativa | RFLP | C2043 | qtl_marker |
Oryza sativa | RFLP | C2807 | qtl_marker |
Oryza sativa | RFLP | C513 | qtl_marker |
Oryza sativa | RFLP | C558 | qtl_marker |
Oryza sativa | RFLP | R93 | qtl_marker |
Oryza sativa | RFLP | R2406 | qtl_marker |
Oryza sativa | RFLP | R2921 | qtl_marker |
Oryza sativa | RFLP | E60696S | qtl_marker |
Triticum aestivum | RFLP | PSR388 | qtl_marker |
Oryza sativa | RFLP | R1721 | qtl_marker |
Oryza sativa | RFLP | R2547 | qtl_marker |
Oryza sativa | RFLP | S12568 | qtl_marker |
Oryza sativa | RFLP | R2688 | qtl_marker |
Term Type | Term Name | Term Accession | |
---|---|---|---|
Plant Structure | seed | PO:0009010 | Search |
Plant Growth and Development Stage | 0 seed germination stage | PO:0007057 | Search |
Growth Stage | 01-germination | GRO:0007043 | Search |
Environment | unknown environment | EO:0007403 | Search |
Trait | germination rate | TO:0000430 | Search |
Taxonomy | Oryza sativa | GR_tax:013681 | Search |