ID | 50695 |
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Name | CQG4 (QTL ACCESSION ) |
Synonyms (1) | CQG4-LFRLTM |
TO TERM | TO:0000503 (leaf rolling time) |
Trait Name | leaf rolling time |
Trait Symbol | LFRLTM |
Type | QTL |
Species | Oryza sativa (Oryza sativa) [ GR_tax:013681 ] |
Germplasm | |
Description | The time taken for the leaf to reach a leaf rolling score of 5. The averages from 5 different plants were used for QTL analyses. For the assay, topmost fully expanded leaves of five plants were removed near the base and placed in a chamber (28C, RH 60%, 19.2MJper square meter). Leaf rolling due to dehydration was characterized on a score of 1 (unrolled) to 5 (completely rolled). Phenotypic effect contributed by Nipponbare allele. The flag leaves at 70 days after transplanting were used for analyses. The means of ten replications per line were used in the data analysis. Chromosomal locations of putative QTLs were determined by single-factor analysis (one-way ANOVA) with the general linear model procedure of QGENE. A probability level of 0.01 was used as the threshold for detecting significant differences in the mean values of the two genotypic classes, homozygous for Nipponbare and Kasalath alleles. Two-way ANOVA for epistatic interaction were also done with QGENE at this threshold. The trait is not related to either of the abaxial or adaxial stomatal frequencies. |
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | CQG4 |
Chromosome | 4 |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 4 | 27,830,899-31,573,683 bp | View Comparative Map | |||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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QTL | JRGP Nip/Kas F2 QTL 2000 | BNL6.32 | 4 | 87.1-108.2 cM | View Comparative Map | |||
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Term Type | Term Name | Term Accession | |
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Plant Structure | flag leaf | PO:0020103 | Search |
Plant Growth and Development Stage | inflorescence emergence stage | PO:0007041 | Search |
Growth Stage | A-vegetative stage | GRO:0007139 | Search |
Growth Stage | B-reproductive stage | GRO:0007140 | Search |
Environment | unknown environment | EO:0007403 | Search |
Plant Growth and Development Stage | sporophyte reproductive stage | PO:0007130 | Search |
Plant Growth and Development Stage | sporophyte vegetative stage | PO:0007134 | Search |
Plant Structure | vascular leaf | PO:0009025 | Search |
Trait | leaf rolling time | TO:0000503 | Search |
Taxonomy | Oryza sativa | GR_tax:013681 | Search |