ID | 50574 |
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Name | CQE3 (QTL ACCESSION ) |
Synonyms (1) | CQE3-PTHT |
TO TERM | TO:0000207 (plant height) |
Trait Name | plant height |
Trait Symbol | PTHT |
Type | QTL |
Species | Oryza sativa (Oryza sativa) [ GR_tax:013681 ] |
Germplasm | |
Description | Plant height was measured at 80 days to obtain the maximum length of the plants. Phenotypic effect contributed by Kasalath allele. The means of ten replications per line were used in the data analysis. Chromosomal locations of putative QTLs were determined by single-factor analysis (one-way ANOVA) with the general linear model procedure of QGENE. Two-way ANOVAs for epistatic interaction were also carried out with QGENE at Pd0.01 threshold. The tests were done only with marker loci linked to QTLs with a single-factor P of d0.01 to reduce the likelihood of committing a type-I error. |
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | CQE3 |
Chromosome | 1 |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 1 | 2,819,089-42,413,852 bp | View Comparative Map | |||
|
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
QTL | JRGP Nip/Kas F2 QTL 2000 | BNL6.32 | 1 | 129.3-176.3 cM | View Comparative Map | |||
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Term Type | Term Name | Term Accession | |
---|---|---|---|
Plant Structure | stem | PO:0009047 | Search |
Plant Growth and Development Stage | sporophyte vegetative stage | PO:0007134 | Search |
Growth Stage | A-vegetative stage | GRO:0007139 | Search |
Growth Stage | B-reproductive stage | GRO:0007140 | Search |
Environment | unknown environment | EO:0007403 | Search |
Plant Growth and Development Stage | sporophyte reproductive stage | PO:0007130 | Search |
Plant Structure | shoot system | PO:0009006 | Search |
Trait | plant height | TO:0000207 | Search |
Taxonomy | Oryza sativa | GR_tax:013681 | Search |