ID | 4933 | ||||||||
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Name | RZ273 (GRAINGENES PROBE) | ||||||||
Synonyms (7) |
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Deprecated Gramene Marker Acc | 48586971 | ||||||||
MAIZEGDB PROBE | p-rz273 | ||||||||
Type | RFLP | ||||||||
Species | Oryza sativa (Oryza sativa) [ GR_tax:013681 ] | ||||||||
Germplasm | |||||||||
Description | Plasmids from the Paterson lab | ||||||||
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | RZ273 |
DNA Treatment | |
Source Type | |
Source Tissue | |
Source Treatment | |
Vector | |
Vector Antibiotic Resistance | |
Fragment Size | |
Vector Excision Enzyme | |
Vector Primers | |
Overgo1 | |
Overgo2 |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 2 | 29,817,446-29,817,623 bp | View Comparative Map | |||
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BNL6.32 | Chr. 2 | 29,819,004-29,819,264 bp | View Comparative Map | |||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Physical | Curated FPC Chr OG_BB Feb 2006 | BNL6.32 | 2 | 28,628,751-28,628,751 bp | View Comparative Map | |||
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BNL6.32 | 5 | 10,156,251-10,156,251 bp | View Comparative Map | |||||
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Curated FPC OG_BB Feb 2006 | BNL6.32 | ctg34 | 986-986 bands | View Comparative Map | ||||
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BNL6.32 | ctg67 | 291-291 bands | View Comparative Map | |||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Physical | Curated FPC Chr OR_CB Feb 2006 | BNL6.32 | 2 | 40,986,541-40,986,541 bp | View Comparative Map | |||
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BNL6.32 | 2 | 48,418,021-48,418,021 bp | View Comparative Map | |||||
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BNL6.32 | 3 | 589,681-589,681 bp | View Comparative Map | |||||
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BNL6.32 | 5 | 16,068,781-16,068,781 bp | View Comparative Map | |||||
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Curated FPC OR_CB Feb 2006 | BNL6.32 | ctg103 | 773-773 bands | View Comparative Map | ||||
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BNL6.32 | ctg47 | 1,756-1,756 bands | View Comparative Map | |||||
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BNL6.32 | ctg48 | 1,568-1,568 bands | View Comparative Map | |||||
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BNL6.32 | ctg50 | 225-225 bands | View Comparative Map | |||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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QTL | IRRI Lem/Teq RI QTL 2001 | BNL6.32 | 2 | 200.1-200.1 cM | View Comparative Map | |||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Physical | Curated FPC Chr OR_BB Feb 2006 | BNL6.32 | 2 | 36,630,001-36,630,001 bp | View Comparative Map | |||
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Curated FPC OR_BB Feb 2006 | BNL6.32 | ctg29 | 1,198-1,198 bands | View Comparative Map | ||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Physical | FPC Chr OC__B Dec 2006 | BNL6.32 | 2 | 64,888,651-64,888,651 bp | View Comparative Map | |||
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BNL6.32 | 2 | 67,283,461-67,283,461 bp | View Comparative Map | |||||
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BNL6.32 | 4 | 24,960,391-24,960,391 bp | View Comparative Map | |||||
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BNL6.32 | 5 | 22,089,571-22,089,571 bp | View Comparative Map | |||||
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BNL6.32 | 5 | 22,507,771-22,507,771 bp | View Comparative Map | |||||
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BNL6.32 | 5 | 51,838,351-51,838,351 bp | View Comparative Map | |||||
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FPC OC__B Dec 2006 | BNL6.32 | ctg231 | 1,071-1,071 bands | View Comparative Map | ||||
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BNL6.32 | ctg235 | 1,039-1,039 bands | View Comparative Map | |||||
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BNL6.32 | ctg406 | 999-999 bands | View Comparative Map | |||||
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BNL6.32 | ctg510 | 286-286 bands | View Comparative Map | |||||
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BNL6.32 | ctg511 | 178-178 bands | View Comparative Map | |||||
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BNL6.32 | ctg548 | 195-195 bands | View Comparative Map | |||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Cornell Diploid 1995 | BNL6.32 | G | 90.6-90.6 cM | View Comparative Map | |||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Composite 2004 | BNL6.32 | 6B | 99-99 cM | View Comparative Map | |||
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QTL | Wheat composite QTL 2004 | BNL6.32 | 6B | 99-99 cM | View Comparative Map | |||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Cornell Wilson 1999 | BNL6.32 | 4 | 92.9-92.9 cM | View Comparative Map | |||
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BNL6.32 | 5 | 216.2-216.2 cM | View Comparative Map | |||||
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IBM 2002 | BNL6.32 | 4 | 352.6-352.6 cM | View Comparative Map | ||||
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BNL6.32 | 5 | 460.6-460.6 cM | View Comparative Map | |||||
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BNL6.32 | 9 | 208.3-208.3 cM | View Comparative Map | |||||
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SSR IBM 2001 | BNL6.32 | 5 | 398.7-398.7 cM | View Comparative Map | ||||
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UMC 1998 | BNL6.32 | 5 | 131-131 cM | View Comparative Map | ||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Klein 2004 | BNL6.32 | LG-01 | 228.1-228.1 cM | View Comparative Map | |||
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Mace 2009 | BNL6.32 | 1 | 175.7-175.7 cM | View Comparative Map | ||||
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QTL | UGA BTx623/IS3620C RL SSR RFLP QTL 2006 | BNL6.32 | 1 | 172-172 cM | View Comparative Map | |||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Cornell RFLP 1994 | BNL6.32 | 2 | 137.6-137.6 cM | View Comparative Map | |||
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Cornell RFLP 2001 | BNL6.32 | 2 | 124.75-124.75 cM | View Comparative Map | ||||
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Species | Type | Name | Assoc. Type |
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Oryza sativa | QTL | AQAP051 | qtl_marker |
Oryza sativa | QTL | AQCU088 | qtl_marker |
Oryza sativa | QTL | AQCU090 | qtl_marker |
Oryza sativa | QTL | AQCU092 | qtl_marker |
Oryza sativa | QTL | AQCU134 | qtl_marker |
Oryza sativa | QTL | AQCU160 | qtl_marker |
Oryza sativa | QTL | AQCU168 | qtl_marker |
Oryza sativa | QTL | AQCU198 | qtl_marker |
Oryza sativa | QTL | AQCU236 | qtl_marker |
Oryza sativa | QTL | AQFW023 | qtl_marker |
Oryza sativa | QTL | AQFW109 | qtl_marker |
Oryza sativa | QTL | AQFW257 | qtl_marker |
Sorghum bicolor | QTL | AQHL032 | qtl_marker |
Zea mays subsp. mays | Maize Bin | Bin 4.06 | bin_marker |
Zea mays subsp. mays | Maize Bin | Bin 5.06 | bin_marker |
Zea mays subsp. mays | Maize Bin | Bin 9.03 | bin_marker |
Oryza sativa | Probed Site | rz273c(ant) | maizegdb_to_gramene |
Oryza sativa Indica Group | EST | AA231741 | related_sequence |
Oryza sativa Indica Group | EST | AA231741 | contained_in_sequence |
Oryza sativa Indica Group | EST | AA231742 | contained_in_sequence |
Oryza sativa Indica Group | EST | AA231742 | related_sequence |