ID | 4910 | ||||||||
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Name | CDO345 (GRAINGENES PROBE) | ||||||||
Synonyms (8) |
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Type | RFLP | ||||||||
Species | Avena sativa (Oat) [ GR_tax:012534 ] | ||||||||
Germplasm | |||||||||
Description | |||||||||
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | CDO345 |
DNA Treatment | |
Source Type | cDNA |
Source Tissue | etiolated leaf |
Source Treatment | etiolated |
Vector | pBluSK |
Vector Antibiotic Resistance | Ampicillin |
Fragment Size | 1.3 |
Vector Excision Enzyme | EcoRI |
Vector Primers | M13 forward/M13 reverse |
Overgo1 | SOG1037 |
Overgo2 |
AATTTCGTGGCTTACATGTTTGCGCCAGCCGTCCTCGTCGCCCCTCTGGGCGCACTCAGCATCATTGTCAGTGCTGTTCT
AGCCCATTTCATGCTGAATGAGAAGTTGCAGCGGGTGGGCGTCCTGGGCTGTGTTCTCTGTATTGTTGGGTCGACGGTGA
TCATCCTCCATGCTCCCGAGGAAGAGGTCCCCGAGCTCGGTGGAGCAGATCTGGCGCTTGGCAACACAACCTACCTTCCT
TTGTTATGCTGCTCTGGCAGTAACTGTGT
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Cornell Diploid 1995 | BNL6.32 | G | 28.7-28.7 cM | View Comparative Map | |||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Close 2943-SNP 2009 | BNL6.32 | 3H | 149.8 | View Comparative Map | |||
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QTL | UMN Fred/Stan QTL 2003 | BNL6.32 | 3H | 52.6-52.6 cM | View Comparative Map | |||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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QTL | Minnesota John/Dor F2 QTL 2000 | BNL6.32 | 1b | 57-57 cM | View Comparative Map | |||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | TTU CTIR 2000 | BNL6.32 | 1 | 198.7-198.7 cM | View Comparative Map | |||
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QTL | Cornell V20A/Oruf QTL 1998 | BNL6.32 | 1 | 102.7-102.7 cM | View Comparative Map | |||
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CTIR CT9993/IR6226 QTL 2000 | BNL6.32 | 1 | 198.7-198.7 cM | View Comparative Map | ||||
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JNIG W1944/Peik QTL 2002 | BNL6.32 | 1 | 321.7-321.7 cM | View Comparative Map | ||||
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MU CT9993/IR6226 QTL 2004 | BNL6.32 | 1 | 245.9-245.9 cM | View Comparative Map | ||||
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TNCGEB CT9993/IR6226 QTL 2004 | BNL6.32 | 1 | 160.8-160.8 cM | View Comparative Map | ||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Cornell RFLP 1994 | BNL6.32 | 1 | 139.1-139.1 cM | View Comparative Map | |||
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Cornell RFLP 2001 | BNL6.32 | 1 | 97.3-97.3 cM | View Comparative Map | ||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Huazhong RFLP 1997 | BNL6.32 | 5 | 103.7-103.7 cM | View Comparative Map | |||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Paterson 2003 | BNL6.32 | A | 105.4-105.4 cM | View Comparative Map | |||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | BNL 1996 | BNL6.32 | 3 | 149-149 cM | View Comparative Map | |||
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Cornell Wilson 1999 | BNL6.32 | 3 | 114.7-114.7 cM | View Comparative Map | ||||
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BNL6.32 | 5 | 33.6-33.6 cM | View Comparative Map | |||||
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IBM 2002 | BNL6.32 | 6 | 489.8-489.8 cM | View Comparative Map | ||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 1 | 37,887,264-37,887,562 bp | View Comparative Map | |||
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BNL6.32 | Chr. 5 | 21,075,079-21,075,305 bp | View Comparative Map | |||||
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CDO345 SL Autorad: Survey blot of the probe CDO345 for the BS125/2/BS125/WLO2 population |