ID | 4903 | ||||||||||
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Name | BCD349 (GRAINGENES PROBE) | ||||||||||
Synonyms (9) |
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MAIZEGDB PROBE | p-bcd349 U: | ||||||||||
Type | RFLP | ||||||||||
Species | Hordeum vulgare (Barley) [ GR_tax:013383 ] | ||||||||||
Germplasm | |||||||||||
Description | |||||||||||
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | BCD349 |
DNA Treatment | |
Source Type | cDNA |
Source Tissue | etiolated leaf |
Source Treatment | etiolated |
Vector | pBluSK- |
Vector Antibiotic Resistance | Ampicillin |
Fragment Size | 1.6 |
Vector Excision Enzyme | EcoRI |
Vector Primers | M13 forward/M13 reverse |
Overgo1 | SOG0082 |
Overgo2 |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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QTL | UMN Fred/Stan QTL 2003 | BNL6.32 | 7H | 105.3-105.3 cM | View Comparative Map | |||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Composite 2004 | BNL6.32 | 7B | 44-44 cM | View Comparative Map | |||
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Cornell Synthetic/Opata 1995 | BNL6.32 | 7B | 38.3-38.3 cM | View Comparative Map | ||||
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QTL | Synthetic/Opata RI RFLP/SSR QTL 1995 | BNL6.32 | 7B | 38.3-38.3 cM | View Comparative Map | |||
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Wheat composite QTL 2004 | BNL6.32 | 3R | 44-44 cM | View Comparative Map | ||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Cornell Diploid 1995 | BNL6.32 | G | 43.3-43.3 cM | View Comparative Map | |||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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QTL | Cornell V20A/glab QTL 2004 | BNL6.32 | 2 | 160.1-160.1 cM | View Comparative Map | |||
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JNIG W1944/Peik QTL 2002 | BNL6.32 | 2 | 0-0 cM | View Comparative Map | ||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Cornell RFLP 1994 | BNL6.32 | 2 | 11.3-11.3 cM | View Comparative Map | |||
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Cornell RFLP 2001 | BNL6.32 | 2 | 12.3-12.3 cM | View Comparative Map | ||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Paterson 2003 | BNL6.32 | E | 4.6-4.6 cM | View Comparative Map | |||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Cornell Wilson 1999 | BNL6.32 | 7 | 131.5-131.5 cM | View Comparative Map | |||
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IBM 2002 | BNL6.32 | 7 | 424.7-424.7 cM | View Comparative Map | ||||
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UMC 1998 | BNL6.32 | 7 | 98.7-98.7 cM | View Comparative Map | ||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 2 | 1,653,783-1,654,516 bp | View Comparative Map | |||
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BNL6.32 | Chr. 2 | 1,653,863-1,654,507 bp | View Comparative Map | |||||
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BNL6.32 | Chr. 2 | 1,654,345-1,654,516 bp | View Comparative Map | |||||
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Species | Type | Name | Assoc. Type |
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Oryza sativa | QTL | AQF037 | qtl_marker |
Oryza sativa | QTL | AQF094 | qtl_marker |
Oryza sativa | QTL | AQF109 | qtl_marker |
Oryza sativa | QTL | AQF145 | qtl_marker |
Hordeum vulgare | QTL | AQFH024 | qtl_marker |
Zea mays subsp. mays | Maize Bin | Bin 7.04 | bin_marker |
Oryza sativa | QTL | CQAH8 | qtl_marker |
Oryza sativa | QTL | CQAH9 | qtl_marker |
Oryza sativa | QTL | CQAH10 | qtl_marker |
Hordeum vulgare | Probed Site | bcd349 | maizegdb_to_gramene |
Hordeum vulgare | EST | BE438649 | related_sequence |
Hordeum vulgare | EST | BE438712 | related_sequence |
Hordeum vulgare | EST | BE438803 | related_sequence |
Hordeum vulgare subsp. vulgare | EST | AA231904 | related_sequence |
BCD349 BROWS Autorad: Survey blot of the probe BCD349 for the comparative barley/rice/oat/wheat/sugarcane project |