ID | 4869 | ||||
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Name | CDO470 (GRAINGENES PROBE) | ||||
Synonyms (4) |
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Type | RFLP | ||||
Species | Avena sativa (Oat) [ GR_tax:012534 ] | ||||
Germplasm | |||||
Description | |||||
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | CDO470 |
DNA Treatment | |
Source Type | cDNA |
Source Tissue | etiolated leaf |
Source Treatment | etiolated |
Vector | pBluSK |
Vector Antibiotic Resistance | Ampicillin |
Fragment Size | 0 |
Vector Excision Enzyme | EcoRI/XhoI |
Vector Primers | M13 forward/M13 reverse |
Overgo1 | SOG0122 |
Overgo2 |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Cornell Diploid 1995 | BNL6.32 | F | 41.9-41.9 cM | View Comparative Map | |||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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QTL | JNIG W1944/Peik QTL 2002 | BNL6.32 | 1 | 127.4-127.4 cM | View Comparative Map | |||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Cornell RFLP 1994 | BNL6.32 | 1 | 121.5-121.5 cM | View Comparative Map | |||
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Cornell RFLP 2001 | BNL6.32 | 1 | 87.8-87.8 cM | View Comparative Map | ||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Klein 2004 | BNL6.32 | LG-03 | 130.1-130.1 cM | View Comparative Map | |||
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Mace 2009 | BNL6.32 | 3 | 110.2-111.5 cM | View Comparative Map | ||||
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Paterson 2003 | BNL6.32 | A | 70.8-70.8 cM | View Comparative Map | ||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Cornell Wilson 1999 | BNL6.32 | 8 | 115.4-115.4 cM | View Comparative Map | |||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 1 | 28,081,941-28,082,082 bp | View Comparative Map | |||
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BNL6.32 | Chr. 1 | 28,081,995-28,082,082 bp | View Comparative Map | |||||
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Species | Type | Name | Assoc. Type |
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Oryza sativa | QTL | AQF025 | qtl_marker |
Oryza sativa | QTL | AQF092 | qtl_marker |
Oryza sativa | QTL | AQF107 | qtl_marker |
Oryza sativa | QTL | AQF118 | qtl_marker |
Oryza sativa | QTL | AQF133 | qtl_marker |
Zea mays subsp. mays | Maize Bin | Bin 8.06 | bin_marker |
Oryza sativa | QTL | CQAH1 | qtl_marker |
Oryza sativa | QTL | CQAH2 | qtl_marker |
Avena sativa | Probed Site | cdo470 | maizegdb_to_gramene |
Avena sativa | EST | AA231887 | related_sequence |
Avena sativa | EST | BE439258 | related_sequence |
Avena sativa | EST | AA231703 | related_sequence |
CDO470 BROWS Autorad: Survey blot of the probe CDO470 for the comparative barley/rice/oat/wheat/sugarcane project |