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Avena sativa RFLP "CDO87"
| ID | 4814 | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Name | CDO87 (GRAINGENES PROBE) | ||||||||||
| Synonyms (9) |
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| MAIZEGDB PROBE | p-cdo87 | ||||||||||
| Type | RFLP | ||||||||||
| Species | Avena sativa (Oat) [ GR_tax:012534 ] | ||||||||||
| Germplasm | |||||||||||
| Description | |||||||||||
| Tags () | None |
Source/Library
Details
| Marker Created: | |
|---|---|
| Marker Updated: | |
| Internal Marker Accession: | CDO87 |
| DNA Treatment | |
| Source Type | cDNA |
| Source Tissue | etiolated leaf |
| Source Treatment | etiolated |
| Vector | pBluSK |
| Vector Antibiotic Resistance | Ampicillin |
| Fragment Size | 0 |
| Vector Excision Enzyme | EcoRI/XhoI |
| Vector Primers | M13 forward/M13 reverse |
| Overgo1 | SOG1687 |
| Overgo2 |
Database Cross-References (1)
Sequences (4)
Related Sequences (4)
Align All Sequences
Map Positions (24)
| Map Type | Map Set | Name | Map | Position | Ext. Links | |||
|---|---|---|---|---|---|---|---|---|
| Genetic | Cornell Diploid 1995 | BNL6.32 | E | 53.1-53.1 cM | View Comparative Map | |||
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| Map Type | Map Set | Name | Map | Position | Ext. Links | |||
|---|---|---|---|---|---|---|---|---|
| Genetic | Cornell SSR 2001 | BNL6.32 | 3 | 203.5-203.5 cM | View Comparative Map | |||
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| QTL | CIRAD IR64/Azu DH QTL 2003 | BNL6.32 | 3 | 235.5-235.5 cM | View Comparative Map | |||
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| CNZU IR1552/Azu RI QTL 2003 | BNL6.32 | 3 | 285-285 cM | View Comparative Map | ||||
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| CNZU IR1552/Azu RI QTL 2004 | BNL6.32 | 3 | 285-285 cM | View Comparative Map | ||||
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| Cornell 9024/LH422 RI QTL 1996 | BNL6.32 | 3 | 10.4-10.4 cM | View Comparative Map | ||||
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| Cornell IR64/Azu DH QTL 2001 | BNL6.32 | 3 | 203.5-203.5 cM | View Comparative Map | ||||
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| Cornell V20A/glab QTL 2004 | BNL6.32 | 3 | 123.2-123.2 cM | View Comparative Map | ||||
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| IRRI IR64/Azu DH QTL 2003 | BNL6.32 | 3 | 187.5-187.5 cM | View Comparative Map | ||||
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| IRRI Pal/IR42 F2 QTL 1995 | BNL6.32 | 3b | 0-0 cM | View Comparative Map | ||||
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| TAMU Lem/Teq RI QTL 1995 | BNL6.32 | 3b | 111-111 cM | View Comparative Map | ||||
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| Zejiang IR64/Azu DH QTL 2001 | BNL6.32 | 3 | 250.8-250.8 cM | View Comparative Map | ||||
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| Zhejian IR1552/Azu RI QTL 2001 | BNL6.32 | 3 | 202.2-202.2 cM | View Comparative Map | ||||
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| Map Type | Map Set | Name | Map | Position | Ext. Links | |||
|---|---|---|---|---|---|---|---|---|
| Genetic | Cornell RFLP 1994 | BNL6.32 | 3 | 107.1-107.1 cM | View Comparative Map | |||
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| Cornell RFLP 2001 | BNL6.32 | 3 | 117.5-117.5 cM | View Comparative Map | ||||
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| Map Type | Map Set | Name | Map | Position | Ext. Links | |||
|---|---|---|---|---|---|---|---|---|
| Genetic | Klein 2004 | BNL6.32 | LG-01 | 16.1-19 cM | View Comparative Map | |||
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| Paterson 2003 | BNL6.32 | I | 50.8-50.8 cM | View Comparative Map | ||||
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| Map Type | Map Set | Name | Map | Position | Ext. Links | |||
|---|---|---|---|---|---|---|---|---|
| Genetic | Cornell Wilson 1999 | BNL6.32 | 5 | 34.7-34.7 cM | View Comparative Map | |||
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| IBM 2002 | BNL6.32 | 1 | 877-877 cM | View Comparative Map | ||||
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| UMC 1998 | BNL6.32 | 1 | 222.2-222.2 cM | View Comparative Map | ||||
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| BNL6.32 | 5 | 16.4-16.4 cM | View Comparative Map | |||||
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| Map Type | Map Set | Name | Map | Position | Ext. Links | |||
|---|---|---|---|---|---|---|---|---|
| Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 3 | 32,945,649-32,945,795 bp | View Comparative Map | |||
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| BNL6.32 | Chr. 3 | 32,949,195-32,949,527 bp | View Comparative Map | |||||
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| BNL6.32 | Chr. 3 | 32,949,318-32,949,568 bp | View Comparative Map | |||||
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Associations (126)
Associated Ontologies (0)
Images (2)
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CDO87 BROWS Autorad: Survey blot of the probe CDO87 for the comparative barley/rice/oat/wheat/sugarcane project |
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CDO87 SL Autorad: Survey blot of the probe CDO87 for the BS125/2/BS125/WLO2 population |
