ID | 4725 | ||||||||||
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Name | CDO665 (GRAINGENES PROBE) | ||||||||||
Synonyms (10) |
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Type | RFLP | ||||||||||
Species | Avena sativa (Oat) [ GR_tax:012534 ] | ||||||||||
Germplasm | |||||||||||
Description | |||||||||||
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | CDO665 |
DNA Treatment | |
Source Type | cDNA |
Source Tissue | etiolated leaf |
Source Treatment | etiolated |
Vector | pBluSK- |
Vector Antibiotic Resistance | Ampicillin |
Fragment Size | 1.2 |
Vector Excision Enzyme | EcoRI/XhoI |
Vector Primers | M13 forward/M13 reverse |
Overgo1 | |
Overgo2 |
AGAGGTAAGGGAGAGAGGCGGCGAAGATGGTGTCGCTGAAGCTGCAGAAGCGTCTGGCCTCGAGCGTCCTCAAGTGCGGC
AAGGGCAAGGTCTGGCTCGACCCCAATGAGGTCAACGAGATCTCCATGGCCAACTCCCGTCAGAACATCCGGAAGTTGGT
CAAGGATGGTTTCATTATCCGGAAGCCTCAGAAGA
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Cornell Diploid 1995 | BNL6.32 | C | 32.3-32.3 cM | View Comparative Map | |||
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Oat, KxO, 2003 | BNL6.32 | 11_41+20 | 7.08-7.08 cM | View Comparative Map | ||||
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BNL6.32 | 14 | 36.3-36.3 cM | View Comparative Map | |||||
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BNL6.32 | 16_23 | 85.2-85.2 cM | View Comparative Map | |||||
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QTL | Cornell Kan/Ogl QTL 1995 | BNL6.32 | 14 | 0-0 cM | View Comparative Map | |||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Barley consensus - 1995 | BNL6.32 | 2H | 24.9-24.9 cM | View Comparative Map | |||
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Barley consensus 2 - 1996 | BNL6.32 | 2H | 53.3-53.3 cM | View Comparative Map | ||||
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Barley consensus 2003 | BNL6.32 | 2H | 108.8-108.8 cM | View Comparative Map | ||||
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BNL6.32 | 2H | 116.7-116.7 cM | View Comparative Map | |||||
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BNL6.32 | 5H | 14.7-14.7 cM | View Comparative Map | |||||
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BNL6.32 | 7H | 76.4-76.4 cM | View Comparative Map | |||||
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QTL | Tadmor/Er Apm RI RFLP/AFLP/SSR QTL 1998 | BNL6.32 | 2H | 62.6-62.6 cM | View Comparative Map | |||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Composite 2004 | BNL6.32 | 2A | 37-37 cM | View Comparative Map | |||
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BNL6.32 | 2B | 56-56 cM | View Comparative Map | |||||
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BNL6.32 | 4A | 121-121 cM | View Comparative Map | |||||
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Cornell Synthetic/Opata 1995 | BNL6.32 | 4A | 96.4-96.4 cM | View Comparative Map | ||||
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QTL | Synthetic/Opata RI RFLP/SSR QTL 1995 | BNL6.32 | 4A | 96.4-96.4 cM | View Comparative Map | |||
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Wheat composite QTL 2004 | BNL6.32 | 2A | 37-37 cM | View Comparative Map | ||||
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BNL6.32 | 2B | 56-56 cM | View Comparative Map | |||||
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BNL6.32 | 4A | 121-121 cM | View Comparative Map | |||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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QTL | CIRAD IR64/Azu DH QTL 2003 | BNL6.32 | 3 | 124.5-124.5 cM | View Comparative Map | |||
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BNL6.32 | 3 | 150.3-150.3 cM | View Comparative Map | |||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Cornell RFLP 1994 | BNL6.32 | 3 | 21.7-21.7 cM | View Comparative Map | |||
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Cornell RFLP 2001 | BNL6.32 | 3 | 24.45-24.45 cM | View Comparative Map | ||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Cornell Wilson 1999 | BNL6.32 | 3 | 134.6-134.6 cM | View Comparative Map | |||
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BNL6.32 | 9 | 32.2-32.2 cM | View Comparative Map | |||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 3 | 21,239,198-21,239,305 bp | View Comparative Map | |||
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Species | Type | Name | Assoc. Type |
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Avena sativa | QTL | AQDF040 | qtl_marker |
Avena sativa | QTL | AQDF041 | qtl_marker |
Zea mays subsp. mays | Maize Bin | Bin 3.09 | bin_marker |
Zea mays subsp. mays | Maize Bin | Bin 9.01 | bin_marker |
Avena sativa | Probed Site | cdo665a | maizegdb_to_gramene |
Avena sativa | Probed Site | cdo665b | maizegdb_to_gramene |
Avena sativa | EST | BE439238 | related_sequence |