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Hordeum vulgare RFLP "BCD1127"
| ID | 4717 | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Name | BCD1127 (GRAINGENES PROBE) | ||||||||||||||||
| Synonyms (14) |
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| Deprecated Gramene Marker Acc | bcd828 | ||||||||||||||||
| GRAINGENES PROBE | BCD828 | ||||||||||||||||
| MAIZEGDB PROBE | p-bcd828 | ||||||||||||||||
| Type | RFLP | ||||||||||||||||
| Species | Hordeum vulgare (Barley) [ GR_tax:013383 ] | ||||||||||||||||
| Germplasm | |||||||||||||||||
| Description | |||||||||||||||||
| Tags () | None |
Source/Library
Details
| Marker Created: | |
|---|---|
| Marker Updated: | |
| Internal Marker Accession: | BCD1127 |
| DNA Treatment | |
| Source Type | cDNA |
| Source Tissue | etiolated leaf |
| Source Treatment | etiolated |
| Vector | pBluSK- |
| Vector Antibiotic Resistance | Ampicillin |
| Fragment Size | 0.7 |
| Vector Excision Enzyme | EcoRI |
| Vector Primers | M13 forward/M13 reverse |
| Overgo1 | |
| Overgo2 |
Database Cross-References (1)
Sequences (5)
Related Sequences (5)
Align All Sequences
Map Positions (29)
| Map Type | Map Set | Name | Map | Position | Ext. Links | |||
|---|---|---|---|---|---|---|---|---|
| Genetic | Barley consensus - 1995 | BNL6.32 | 3H | -0.1--0.1 cM | View Comparative Map | |||
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| Barley consensus 2 - 1996 | BNL6.32 | 3H | 42.1-42.1 cM | View Comparative Map | ||||
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| NABGMP SxM 1993 | BNL6.32 | 3 | 77.8-77.8 cM | View Comparative Map | ||||
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| QTL | Steptoe/Morex DH RFLP QTL 2006 | BNL6.32 | 3H | 77.8-77.8 cM | View Comparative Map | |||
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| Tadmor/Er Apm RI RFLP/AFLP/SSR QTL 1998 | BNL6.32 | 3H | 204.8-204.8 cM | View Comparative Map | ||||
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| Map Type | Map Set | Name | Map | Position | Ext. Links | |||
|---|---|---|---|---|---|---|---|---|
| Genetic | Composite 2004 | BNL6.32 | 3A | 76-76 cM | View Comparative Map | |||
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| BNL6.32 | 3A | 80-80 cM | View Comparative Map | |||||
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| Cornell Synthetic/Opata 1995 | BNL6.32 | 3A | 65.6-65.6 cM | View Comparative Map | ||||
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| QTL | Synthetic/Opata RI RFLP/SSR QTL 1995 | BNL6.32 | 3A | 65.6-65.6 cM | View Comparative Map | |||
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| Wheat composite QTL 2004 | BNL6.32 | 3A | 76-76 cM | View Comparative Map | ||||
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| BNL6.32 | 3R | 80-80 cM | View Comparative Map | |||||
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| Map Type | Map Set | Name | Map | Position | Ext. Links | |||
|---|---|---|---|---|---|---|---|---|
| QTL | NDSU Langdon QTL 2002 | BNL6.32 | 3AS | 43.1-43.1 cM | View Comparative Map | |||
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| Map Type | Map Set | Name | Map | Position | Ext. Links | |||
|---|---|---|---|---|---|---|---|---|
| Genetic | Cornell Diploid 1995 | BNL6.32 | C | 43.2-43.2 cM | View Comparative Map | |||
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| Oat, KxO, 2003 | BNL6.32 | 13 | 11.9-11.9 cM | View Comparative Map | ||||
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| BNL6.32 | 15 | 48.1-48.1 cM | View Comparative Map | |||||
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| Map Type | Map Set | Name | Map | Position | Ext. Links | |||
|---|---|---|---|---|---|---|---|---|
| QTL | JNIG W1944/Peik QTL 2002 | BNL6.32 | 1 | 181.7-181.7 cM | View Comparative Map | |||
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| Map Type | Map Set | Name | Map | Position | Ext. Links | |||
|---|---|---|---|---|---|---|---|---|
| Genetic | Cornell RFLP 1994 | BNL6.32 | 1 | 130.1-130.1 cM | View Comparative Map | |||
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| Cornell RFLP 2001 | BNL6.32 | 1 | 92.55-92.55 cM | View Comparative Map | ||||
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| Map Type | Map Set | Name | Map | Position | Ext. Links | |||
|---|---|---|---|---|---|---|---|---|
| Genetic | Klein 2004 | BNL6.32 | LG-03 | 130.1-133.3 cM | View Comparative Map | |||
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| Mace 2009 | BNL6.32 | 3 | 110.2-110.2 cM | View Comparative Map | ||||
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| Map Type | Map Set | Name | Map | Position | Ext. Links | |||
|---|---|---|---|---|---|---|---|---|
| Genetic | BNL 1996 | BNL6.32 | 3 | 147.2-147.2 cM | View Comparative Map | |||
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| Cornell Wilson 1999 | BNL6.32 | 3 | 118.9-118.9 cM | View Comparative Map | ||||
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| BNL6.32 | 3 | 122.2-122.2 cM | View Comparative Map | |||||
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| BNL6.32 | 8 | 78-78 cM | View Comparative Map | |||||
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| UMC 1998 | BNL6.32 | 6 | 133.3-133.3 cM | View Comparative Map | ||||
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| Map Type | Map Set | Name | Map | Position | Ext. Links | |||
|---|---|---|---|---|---|---|---|---|
| Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 1 | 28,279,770-28,280,688 bp | View Comparative Map | |||
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| BNL6.32 | Chr. 1 | 28,280,549-28,280,829 bp | View Comparative Map | |||||
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| BNL6.32 | Chr. 1 | 28,280,634-28,280,817 bp | View Comparative Map | |||||
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| BNL6.32 | Chr. 1 | 28,280,705-28,280,829 bp | View Comparative Map | |||||
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Associations (25)
Associated Ontologies (0)
Images (1)
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BCD828 SL Autorad: Survey blot of the probe BCD828 for the BS125/2/BS125/WLO2 population |
