ID | 4658 | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Name | CDO476 (GRAINGENES PROBE) | ||||||||||||
Synonyms (11) |
|
||||||||||||
GRAINGENES PROBE | CDO482 | ||||||||||||
Type | RFLP | ||||||||||||
Species | Avena sativa (Oat) [ GR_tax:012534 ] | ||||||||||||
Germplasm | |||||||||||||
Description | |||||||||||||
Tags () | None |
Marker Created: | |
---|---|
Marker Updated: | |
Internal Marker Accession: | CDO476 |
DNA Treatment | |
Source Type | cDNA |
Source Tissue | etiolated leaf |
Source Treatment | |
Vector | pBluSK |
Vector Antibiotic Resistance | Ampicillin |
Fragment Size | 1.5 |
Vector Excision Enzyme | XhoI |
Vector Primers | |
Overgo1 | |
Overgo2 |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Genetic | Cornell Diploid 1995 | BNL6.32 | A | 96.6-96.6 cM | View Comparative Map | |||
|
||||||||
BNL6.32 | G | 0-0 cM | View Comparative Map | |||||
|
||||||||
Oat, KxO, 2003 | BNL6.32 | 22_44+18 | 5.12-5.12 cM | View Comparative Map | ||||
|
||||||||
BNL6.32 | 22_44+18 | 33.4-33.4 cM | View Comparative Map | |||||
|
||||||||
QTL | Cornell Kan/Ogl QTL 1995 | BNL6.32 | 18 | 0-0 cM | View Comparative Map | |||
|
||||||||
BNL6.32 | 18 | 9.2-9.2 cM | View Comparative Map | |||||
|
||||||||
BNL6.32 | 18 | 12.7-12.7 cM | View Comparative Map | |||||
|
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Genetic | Composite 2004 | BNL6.32 | 3A | 38-38 cM | View Comparative Map | |||
|
||||||||
BNL6.32 | 3D | 119-119 cM | View Comparative Map | |||||
|
||||||||
BNL6.32 | 6A | 21-21 cM | View Comparative Map | |||||
|
||||||||
BNL6.32 | 6B | 61-61 cM | View Comparative Map | |||||
|
||||||||
Cornell Synthetic/Opata 1995 | BNL6.32 | 3A | 209.8-209.8 cM | View Comparative Map | ||||
|
||||||||
BNL6.32 | 6A | -80.5--80.5 cM | View Comparative Map | |||||
|
||||||||
BNL6.32 | 6B | -42--42 cM | View Comparative Map | |||||
|
||||||||
QTL | Synthetic/Opata RI RFLP/SSR QTL 1995 | BNL6.32 | 3A | 209.8-209.8 cM | View Comparative Map | |||
|
||||||||
BNL6.32 | 6A | -80.5--80.5 cM | View Comparative Map | |||||
|
||||||||
BNL6.32 | 6B | -42--42 cM | View Comparative Map | |||||
|
||||||||
Wheat composite QTL 2004 | BNL6.32 | 3A | 38-38 cM | View Comparative Map | ||||
|
||||||||
BNL6.32 | 3A | 119-119 cM | View Comparative Map | |||||
|
||||||||
BNL6.32 | 6A | 21-21 cM | View Comparative Map | |||||
|
||||||||
BNL6.32 | 6B | 61-61 cM | View Comparative Map | |||||
|
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Genetic | Cornell Wilson 1999 | BNL6.32 | 10 | 81.2-81.2 cM | View Comparative Map | |||
|
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 2 | 292,573-292,839 bp | View Comparative Map | |||
|
||||||||
BNL6.32 | Chr. 2 | 292,759-293,311 bp | View Comparative Map | |||||
|
||||||||
BNL6.32 | Chr. 7 | 12,811,214-12,811,803 bp | View Comparative Map | |||||
|
||||||||
BNL6.32 | Chr. 7 | 12,811,783-12,811,867 bp | View Comparative Map | |||||
|
||||||||
BNL6.32 | Chr. 7 | 12,811,786-12,812,057 bp | View Comparative Map | |||||
|
Species | Type | Name | Assoc. Type |
---|---|---|---|
Avena sativa | QTL | AQDF109 | qtl_marker |
Avena sativa | QTL | AQDF110 | qtl_marker |
Avena sativa | QTL | AQDF111 | qtl_marker |
Avena sativa | QTL | AQDF112 | qtl_marker |
Zea mays subsp. mays | Maize Bin | Bin 10.04 | bin_marker |
Avena sativa | Probed Site | cdo482 | maizegdb_to_gramene |
Avena sativa | EST | BE439373 | related_sequence |
Avena sativa | EST | BE439342 | related_sequence |
Avena sativa | EST | BE439306 | related_sequence |
Avena sativa | EST | BE439121 | related_sequence |