ID | 4630 | ||||||||
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Name | CDO520 (GRAINGENES PROBE) | ||||||||
Synonyms (7) |
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MAIZEGDB PROBE | p-cdo520 | ||||||||
Type | RFLP | ||||||||
Species | Avena sativa (Oat) [ GR_tax:012534 ] | ||||||||
Germplasm | |||||||||
Description | |||||||||
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | CDO520 |
DNA Treatment | |
Source Type | cDNA |
Source Tissue | etiolated leaf |
Source Treatment | etiolated |
Vector | pBluSK |
Vector Antibiotic Resistance | Ampicillin |
Fragment Size | 0 |
Vector Excision Enzyme | EcoRI/XhoI |
Vector Primers | M13 forward/M13 reverse |
Overgo1 | SOG0617 |
Overgo2 |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Cornell Diploid 1995 | BNL6.32 | A | 46.9-46.9 cM | View Comparative Map | |||
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BNL6.32 | E | 23-23 cM | View Comparative Map | |||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | IGCN 1998 | BNL6.32 | 11 | 39.2-39.2 cM | View Comparative Map | |||
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QTL | Cornell V20A/Oruf QTL 1998 | BNL6.32 | 11 | 102.9-102.9 cM | View Comparative Map | |||
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IGCN ZYQ18/JX17 DH QTL 1998 | BNL6.32 | 11 | 39.2-39.2 cM | View Comparative Map | ||||
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IRRI Pal/IR42 F2 QTL 1995 | BNL6.32 | 11 | 99.3-99.3 cM | View Comparative Map | ||||
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TTU IR64/Orufi RI QTL 2003 | BNL6.32 | 11 | 31-31 cM | View Comparative Map | ||||
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UCD Lab/Bla QTL 1998 | BNL6.32 | 11 | 165-165 cM | View Comparative Map | ||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Cornell RFLP 1994 | BNL6.32 | 11 | 105.8-105.8 cM | View Comparative Map | |||
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Cornell RFLP 2001 | BNL6.32 | 11 | 106.4-106.4 cM | View Comparative Map | ||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Mace 2009 | BNL6.32 | 5 | 76.4-76.4 cM | View Comparative Map | |||
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Paterson 2003 | BNL6.32 | H | 55.4-55.4 cM | View Comparative Map | ||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Cornell Wilson 1999 | BNL6.32 | 4 | 24.4-24.4 cM | View Comparative Map | |||
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UMC 1998 | BNL6.32 | 4 | 23-23 cM | View Comparative Map | ||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 11 | 23,162,431-23,162,574 bp | View Comparative Map | |||
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Species | Type | Name | Assoc. Type |
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Triticum aestivum | Breakpoint Interval | 5DL1-0.60-0.74 | Wheat-EST-BI |
Oryza sativa | QTL | AQAR001 | qtl_marker |
Oryza sativa | QTL | AQAR002 | qtl_marker |
Zea mays subsp. mays | Maize Bin | Bin 4.02 | bin_marker |
Avena sativa | OVERGO | SOG0617 | related_probe |
Avena sativa | EST | BE439089 | related_sequence |
Avena sativa | EST | AA231923 | related_sequence |
CDO520 BROWS Autorad: Survey blot of the probe CDO520 for the comparative barley/rice/oat/wheat/sugarcane project | |
CDO520 SL Autorad: Survey blot of the probe CDO520 for the BS125/2/BS125/WLO2 population |