ID | 4626 | ||||||||
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Name | CDO346 (GRAINGENES PROBE) | ||||||||
Synonyms (8) |
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Type | RFLP | ||||||||
Species | Avena sativa (Oat) [ GR_tax:012534 ] | ||||||||
Germplasm | |||||||||
Description | |||||||||
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | CDO346 |
DNA Treatment | |
Source Type | cDNA |
Source Tissue | etiolated leaf |
Source Treatment | etiolated |
Vector | pBluSK |
Vector Antibiotic Resistance | Ampicillin |
Fragment Size | 0.8 |
Vector Excision Enzyme | EcoRI |
Vector Primers | M13 forward/M13 reverse |
Overgo1 | |
Overgo2 |
TTGAACCGTTCTTTTCTATCTGAAAATAAACAAGTCGAGCTACACTTGAGGTCCCTAGGAATACTAGTTTCAACATATTC
TCAAACACATCTCACGGGCCTCTCAAAATTTCACGGTAGCTACCCTATATCTATTCAGGATGATGATGAATCAGTAGCTA
TTGGGCCACATTTGGTTAGCCTGAGCAGCATTCAAATTACTGTCGCTCGGGTTTCGGTGTTCAGGACCCAGGCCTTGCTG
CGACTGCCCAAGCGCTGCACCAT
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Cornell Diploid 1995 | BNL6.32 | A | 78.2-78.2 cM | View Comparative Map | |||
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Oat, KxO, 2003 | BNL6.32 | 1 | 14.7-14.7 cM | View Comparative Map | ||||
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BNL6.32 | 3+38 | 73.3-73.3 cM | View Comparative Map | |||||
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QTL | Cornell Kan/Ogl QTL 1995 | BNL6.32 | 1 | 13-13 cM | View Comparative Map | |||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Composite 2004 | BNL6.32 | 1B | 103-103 cM | View Comparative Map | |||
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BNL6.32 | 5B | 76-76 cM | View Comparative Map | |||||
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BNL6.32 | 5D | 82-82 cM | View Comparative Map | |||||
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Cornell Synthetic/Opata 1995 | BNL6.32 | 1B | 121.5-121.5 cM | View Comparative Map | ||||
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BNL6.32 | 5D | 142.9-142.9 cM | View Comparative Map | |||||
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QTL | Synthetic/Opata RI RFLP/SSR QTL 1995 | BNL6.32 | 1B | 121.5-121.5 cM | View Comparative Map | |||
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BNL6.32 | 5D | 142.9-142.9 cM | View Comparative Map | |||||
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Wheat composite QTL 2004 | BNL6.32 | 1B | 103-103 cM | View Comparative Map | ||||
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BNL6.32 | 5B | 76-76 cM | View Comparative Map | |||||
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BNL6.32 | 5B | 82-82 cM | View Comparative Map | |||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Cornell RFLP 1994 | BNL6.32 | 5 | 127.1-127.1 cM | View Comparative Map | |||
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Cornell RFLP 2001 | BNL6.32 | 5 | 114.15-114.15 cM | View Comparative Map | ||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Cornell Wilson 1999 | BNL6.32 | 6 | 168.1-168.1 cM | View Comparative Map | |||
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BNL6.32 | 8 | 79.1-79.1 cM | View Comparative Map | |||||
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Species | Type | Name | Assoc. Type |
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Avena sativa | QTL | AQDF001 | qtl_marker |
Avena sativa | QTL | AQDF002 | qtl_marker |
Avena sativa | QTL | AQDF003 | qtl_marker |
Zea mays subsp. mays | Maize Bin | Bin 6.08 | bin_marker |
Zea mays subsp. mays | Maize Bin | Bin 8.03 | bin_marker |
Avena sativa | Probed Site | cdo346a | maizegdb_to_gramene |
Avena sativa | Probed Site | cdo346b | maizegdb_to_gramene |
Avena sativa | EST | BE439085 | related_sequence |