ID | 45964 |
---|---|
Name | CQAE13 (QTL ACCESSION ) |
Synonyms (1) | CQAE13-SPKFRT |
Published Symbol | ste10.1 |
TO TERM | TO:0000180 (spikelet fertility) |
Trait Name | spikelet fertility |
Trait Symbol | SPKFRT |
Type | QTL |
Species | Oryza sativa (Oryza sativa) [ GR_tax:013681 ] |
Germplasm | |
Description | The QTLs were interpolated on Integrated DH map based on the marker orders derived from Cornell RFLP 2001 map. The QTL was detected in BC2F2 population derived from an interspecific cross between Caiapo an upland O. sativa japonica variety from Brazil and O. rufipogon from Malaysia. Trait evaluated as percent sterility. Determined by number of empty spikelets divided by total number of spikelets per plant evaluated for each panicle on all ten plants. |
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | CQAE13 |
Chromosome | 10 |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 10 | 9,747,442-18,655,769 bp | View Comparative Map | |||
|
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
QTL | Cornell IR64/Azu DH QTL 2001 | BNL6.32 | 10 | 25.2-73 cM | View Comparative Map | |||
|
Species | Type | Name | Assoc. Type |
---|---|---|---|
Avena sativa | RFLP | CDO93 | qtl_marker |
Oryza sativa Indica Group | SSR | RM239 | qtl_marker |
Oryza sativa Indica Group | SSR | RM311 | qtl_marker |
Oryza sativa | RFLP | G1084 | qtl_marker |
Oryza sativa | RFLP | RG257 | qtl_marker |
Oryza sativa Japonica Group | SSR | RM467 | qtl_marker |
Oryza sativa Japonica Group | SSR | RM596 | qtl_marker |
Oryza sativa | RFLP | RZ625 | qtl_marker |
Oryza sativa | RFLP | RG241 | qtl_marker |
Oryza sativa Japonica Group | SSR | RM184 | qtl_marker |
Oryza sativa Indica Group | SSR | RM271 | qtl_marker |
Oryza sativa Indica Group | SSR | RM269 | qtl_marker |
Oryza sativa Indica Group | SSR | RM258 | qtl_marker |
Oryza sativa Indica Group | SSR | RM304 | qtl_marker |
Oryza sativa Indica Group | SSR | RM216 | qtl_marker |
Oryza sativa | RFLP | G2155 | qtl_marker |
Term Type | Term Name | Term Accession | |
---|---|---|---|
Plant Structure | spikelet | PO:0009051 | Search |
Plant Growth and Development Stage | inflorescence emergence stage | PO:0007041 | Search |
Plant Growth and Development Stage | sporophyte reproductive stage | PO:0007130 | Search |
Growth Stage | 06-heading stage | GRO:0007044 | Search |
Growth Stage | B-reproductive stage | GRO:0007140 | Search |
Environment | unknown environment | EO:0007403 | Search |
Trait | spikelet fertility | TO:0000180 | Search |
Taxonomy | Oryza sativa | GR_tax:013681 | Search |