ID | 45938 |
---|---|
Name | AQGH011 (QTL ACCESSION ) |
Synonyms (1) | AQGH011-SDSPCENT |
Published Symbol | qSS9 |
TO TERM | TO:0000455 (seed set percent) |
Trait Name | seed set percent |
Trait Symbol | SDSPCENT |
Type | QTL |
Species | Oryza sativa (Oryza sativa) [ GR_tax:013681 ] |
Germplasm | |
Description | The QTL have been detected from the introgression lines carrying variant introgressed segments from Chinese common wild rice (Oryza rufipogon Griff.) in the background of Indica cultivar, Guichao 2. The QTL have been display on the IR64/Azucena DH SSR map. Seed set rate has been measured to evaluate seed set percent and used for QTL analysis. The allele from O. rufipogon has negative phenotypic effect. |
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | AQGH011 |
Chromosome | 9 |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 9 | 19,788,222-20,068,866 bp | View Comparative Map | |||
|
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
QTL | Cornell IR64/Azu DH QTL 2001 | BNL6.32 | 9 | 82.4-82.4 cM | View Comparative Map | |||
|
Species | Type | Name | Assoc. Type |
---|---|---|---|
Oryza sativa Japonica Group | SSR | RM107 | qtl_marker |
Oryza sativa | SSR | RM160 | qtl_marker |
Oryza sativa Indica Group | SSR | RM328 | qtl_marker |
Oryza sativa Indica Group | SSR | RM201 | qtl_marker |
Oryza sativa | SSR | OSR28 | qtl_marker |
Term Type | Term Name | Term Accession | |
---|---|---|---|
Plant Structure | seed | PO:0009010 | Search |
Plant Growth and Development Stage | whole plant fruit ripening complete stage | PO:0007038 | Search |
Growth Stage | 09-mature grain stage | GRO:0007045 | Search |
Environment | unknown environment | EO:0007403 | Search |
Trait | seed set percent | TO:0000455 | Search |
Taxonomy | Oryza sativa | GR_tax:013681 | Search |