ID | 45868 |
---|---|
Name | CQAE11 (QTL ACCESSION ) |
Synonyms (1) | CQAE11-PNNB |
Published Symbol | ppl6.1 |
TO TERM | TO:0000152 (panicle number) |
Trait Name | panicle number |
Trait Symbol | PNNB |
Type | QTL |
Species | Oryza sativa (Oryza sativa) [ GR_tax:013681 ] |
Germplasm | |
Description | The QTLs were interpolated on Integrated DH map based on the marker orders derived from Cornell RFLP 2001 map. The QTL was detected in BC2F2 population derived from an interspecific cross between Caiapo an upland O. sativa japonica variety from Brazil and O. rufipogon from Malaysia. Panicle number per plant was an average from 10 plants. Panicles having less than 5 seeds were not included. |
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | CQAE11 |
Chromosome | 6 |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 6 | 19,499,320-27,252,383 bp | View Comparative Map | |||
|
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
QTL | Cornell IR64/Azu DH QTL 2001 | BNL6.32 | 6 | 74.9-125.4 cM | View Comparative Map | |||
|
Species | Type | Name | Assoc. Type |
---|---|---|---|
Avena sativa | RFLP | CDO544 | qtl_marker |
Oryza sativa Indica Group | SSR | RM3 | qtl_marker |
Oryza sativa Japonica Group | SSR | RM541 | qtl_marker |
Oryza sativa Japonica Group | SSR | RM454 | qtl_marker |
Oryza sativa | RFLP | RG162 | qtl_marker |
Oryza sativa | RFLP | RG172 | qtl_marker |
Oryza sativa Indica Group | SSR | RM275 | qtl_marker |
Oryza sativa | SSR | RM162 | qtl_marker |
Oryza sativa Indica Group | SSR | RM343 | qtl_marker |
Oryza sativa Japonica Group | SSR | RM528 | qtl_marker |
Oryza sativa Indica Group | SSR | RM30 | qtl_marker |
Oryza sativa | RFLP | RG648 | qtl_marker |
Oryza sativa Indica Group | SSR | RM340 | qtl_marker |
Oryza sativa | RFLP | RG653 | qtl_marker |
Term Type | Term Name | Term Accession | |
---|---|---|---|
Plant Structure | inflorescence | PO:0009049 | Search |
Plant Growth and Development Stage | inflorescence emergence stage | PO:0007041 | Search |
Plant Growth and Development Stage | sporophyte reproductive stage | PO:0007130 | Search |
Growth Stage | 06-heading stage | GRO:0007044 | Search |
Growth Stage | B-reproductive stage | GRO:0007140 | Search |
Environment | unknown environment | EO:0007403 | Search |
Trait | panicle number | TO:0000152 | Search |
Taxonomy | Oryza sativa | GR_tax:013681 | Search |