ID | 45820 |
---|---|
Name | CQAE9 (QTL ACCESSION ) |
Synonyms (1) | CQAE9-PTHT |
Published Symbol | ph4.1 |
TO TERM | TO:0000207 (plant height) |
Trait Name | plant height |
Trait Symbol | PTHT |
Type | QTL |
Species | Oryza sativa (Oryza sativa) [ GR_tax:013681 ] |
Germplasm | |
Description | The QTLs were interpolated on Integrated DH map based on the marker orders derived from Cornell RFLP 2001 map. The QTL was detected in BC2F2 population derived from an interspecific cross between Caiapo an upland O. sativa japonica variety from Brazil and O. rufipogon from Malaysia. Measured as the average height of 10 plants in cm from soil surface to the tip of the tallest panicle (awn excluded). |
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | CQAE9 |
Chromosome | 4 |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 4 | 21,242,569-29,061,127 bp | View Comparative Map | |||
|
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
QTL | Cornell IR64/Azu DH QTL 2001 | BNL6.32 | 4 | 76.1-118.3 cM | View Comparative Map | |||
|
Species | Type | Name | Assoc. Type |
---|---|---|---|
Oryza sativa Japonica Group | SSR | RM119 | qtl_marker |
Oryza sativa | RFLP | RZ565 | qtl_marker |
Oryza sativa | RFLP | RZ675 | qtl_marker |
Oryza sativa Indica Group | SSR | RM273 | qtl_marker |
Oryza sativa Indica Group | SSR | RM252 | qtl_marker |
Oryza sativa Japonica Group | SSR | RM456 | qtl_marker |
Oryza sativa Indica Group | SSR | RM241 | qtl_marker |
Oryza sativa | RFLP | RG163 | qtl_marker |
Oryza sativa Japonica Group | SSR | RM451 | qtl_marker |
Oryza sativa Japonica Group | SSR | RM470 | qtl_marker |
Oryza sativa Indica Group | SSR | RM303 | qtl_marker |
Oryza sativa Indica Group | SSR | RM317 | qtl_marker |
Oryza sativa Japonica Group | SSR | RM564 | qtl_marker |
Oryza sativa | RFLP | RG214 | qtl_marker |
Term Type | Term Name | Term Accession | |
---|---|---|---|
Plant Structure | shoot system | PO:0009006 | Search |
Plant Growth and Development Stage | whole plant fruit ripening complete stage | PO:0007038 | Search |
Growth Stage | 09-mature grain stage | GRO:0007045 | Search |
Environment | unknown environment | EO:0007403 | Search |
Growth Stage | A-vegetative stage | GRO:0007139 | Search |
Growth Stage | B-reproductive stage | GRO:0007140 | Search |
Plant Growth and Development Stage | sporophyte reproductive stage | PO:0007130 | Search |
Plant Growth and Development Stage | sporophyte vegetative stage | PO:0007134 | Search |
Trait | plant height | TO:0000207 | Search |
Taxonomy | Oryza sativa | GR_tax:013681 | Search |