ID | 45728 |
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Name | AQGH003 (QTL ACCESSION ) |
Synonyms (1) | AQGH003-SDNB |
Published Symbol | qGPL1 |
TO TERM | TO:0000445 (seed number) |
Trait Name | seed number |
Trait Symbol | SDNB |
Type | QTL |
Species | Oryza sativa (Oryza sativa) [ GR_tax:013681 ] |
Germplasm | |
Description | The QTL have been detected from the introgression lines carrying variant introgressed segments from Chinese common wild rice (Oryza rufipogon Griff.) in the background of Indica cultivar, Guichao 2. The QTL have been display on the IR64/Azucena DH SSR map. Grains per plant has been measured to evaluate seed number and used for QTL analysis. The allele from O. rufipogon has negative phenotypic effect. |
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | AQGH003 |
Chromosome | 1 |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 1 | 4,213,951-4,214,192 bp | View Comparative Map | |||
|
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
QTL | Cornell IR64/Azu DH QTL 2001 | BNL6.32 | 1 | 26.2-26.2 cM | View Comparative Map | |||
|
Species | Type | Name | Assoc. Type |
---|---|---|---|
Oryza sativa Indica Group | SSR | RM84 | qtl_marker |
Oryza sativa Indica Group | SSR | RM323 | qtl_marker |
Oryza sativa Japonica Group | SSR | RM428 | qtl_marker |
Oryza sativa | RFLP | RG246 | qtl_marker |
Term Type | Term Name | Term Accession | |
---|---|---|---|
Plant Structure | seed | PO:0009010 | Search |
Plant Growth and Development Stage | whole plant fruit ripening complete stage | PO:0007038 | Search |
Growth Stage | 09-mature grain stage | GRO:0007045 | Search |
Environment | unknown environment | EO:0007403 | Search |
Trait | seed number | TO:0000445 | Search |
Taxonomy | Oryza sativa | GR_tax:013681 | Search |