ID | 44796 | ||
---|---|---|---|
Name | RM5479 | ||
Synonyms (2) |
|
||
Type | SSR | ||
Species | Oryza sativa Japonica Group (Oryza sativa japonica) [ GR_tax:013684 ] | ||
Germplasm | |||
Description | |||
Tags () | None |
Marker Created: | |
---|---|
Marker Updated: | |
Internal Marker Accession: | RM5479 |
Repeat Motif | (TC)21 |
Anneal Temperature | 55 |
Expected PCR Product Size | 197 |
Sequence Source | AY022154 |
Linkage Group | |
Remarks |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 12 | 24,378,969-24,379,166 bp | View Comparative Map | |||
|
||||||||
BNL6.32 | Chr. 12 | 24,378,975-24,379,131 bp | View Comparative Map | |||||
|
||||||||
BNL6.32 | Chr. 12 | 24,378,984-24,379,135 bp | View Comparative Map | |||||
|
||||||||
BNL6.32 | Chr. 12 | 24,378,989-24,379,280 bp | View Comparative Map | |||||
|
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
QTL | CNHZAU Zhe97/Wuy2 QTL 2004 | BNL6.32 | 12 | 93.3-93.3 cM | View Comparative Map | |||
|
||||||||
JUT IR36/Genj QTL 2004 | BNL6.32 | 12 | 74.1-74.1 cM | View Comparative Map | ||||
|
Species | Type | Name | Assoc. Type |
---|---|---|---|
Oryza sativa | QTL | AQEI041 | qtl_marker |
Oryza sativa | QTL | AQEI126 | qtl_marker |
Oryza sativa | QTL | AQFJ077 | qtl_marker |
Oryza sativa Japonica Group | SSR | AUT28584 | equivalent_to |
Oryza sativa Japonica Group | SSR | MRG4479.HAU4479 | equivalent_to |
Oryza sativa Japonica Group | SSR | MRG4479.RGP4479 | equivalent_to |
Oryza sativa Japonica Group | Primer | MRG4479.ARS4479_forward | primer_forward |
Oryza sativa Japonica Group | Primer | MRG4479.ARS4479_reverse | primer_reverse |
Oryza sativa | Genomic DNA | AY022154 | source_sequence |