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Zea mays mRNA "AY110056"
| ID | 41035 |
|---|---|
| Name |
AY110056 (GenBank Accession  ) |
| Synonyms (1) | PZA01972.14 |
| GenBank GI | 21214127 |
| GenBank Version | AY110056.1 |
| MaizeGDB cDNA - EST | CL10675_1 |
| MaizeGDB SNP | AY110056_SNP |
| MAIZEGDB EST | CL10675_1 |
| Type | mRNA |
| Species | Zea mays (Maize) [ GR_tax:014450 ] |
| Germplasm | |
| Description | Zea mays CL10675_1 mRNA sequence. |
| Tags () | None |
Source/Library
Details
| Marker Created: | |
|---|---|
| Marker Updated: | |
| Internal Marker Accession: | AY110056 |
| Date Created | |
| Date Updated | |
| Ec Number | |
| Allele | |
| Bound Moiety | |
| Cell Line | |
| Cell Type | |
| Chromosome | |
| Citation | |
| Clone | |
| Clone Lib | Maize Mapping Project/DuPont Cornsensus Library |
| Codon Start | |
| Comment |
If you are interested in getting corresponding physical clones, these are publicly available from ZmDB and may be found by BLAST searching at MSL, maizemap.org; ZmDB, www.zmdb.iastate.edu; TIGR, www.tigr.org; or NCBI, www.ncbi.nlm.nih.gov. When the source of the maize cDNA sequences is either Virginia Walbot, Stanford or Pat Schnable, Iowa State, then clones may be requested from ZmDB: www.zmdb.iastate.edu. |
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| Gene | |
| Germline | |
| Haplotype | |
| Insertion Seq | |
| Isolate | |
| Isolation Source | |
| Keyword | HTC |
| Lab Host | |
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| Locus Tag | |
| Macronuclear | |
| Map | |
| Mod Base | |
| Mol Type | mRNA |
| Note |
this sequence is part of a project of EST assemblies resulting from the application of public contigs to seed DuPont contigs; this resource was assembled by DuPont as part of a collaboration for the overgo addressing of BACs in conjunction with the Maize Mapping Project |
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| Origin | |
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| Plasmid | |
| Pop Variant | |
| Product | |
| Protein Id | |
| Pseudo | |
| Rearranged | |
| Ref Authors | Coe,E.H. |
| Ref Location |
Submitted (25-APR-2002) Maize Mapping Project, University of Missouri, Columbia, MO 65211, USA |
| Ref Pubmed | |
| Ref Title | Direct Submission |
| Ref Year | 2004 |
| Rpt Family | |
| Rpt Type | |
| Rpt Unit | |
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| Standard Name | |
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| Tissue Lib | |
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| Transl Except | |
| Transl Table | |
| Translation | |
| Transposon | |
| Variety |
Sequences (2)
mRNA Sequence (1)
Related Sequence (1)
Align All Sequences
Map Positions (4)
| Map Type | Map Set | Name | Map | Position | Ext. Links | |||
|---|---|---|---|---|---|---|---|---|
| Genetic | Nested Association Mapping (NAM) 2008 | BNL6.32 | 8 | 61.3-61.3 cM | View Comparative Map | |||
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| Physical | FPC Chr maize May 2006 | BNL6.32 | 8 | 103,203,801-103,203,801 bp | ||||
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| FPC maize May 2006 | BNL6.32 | ctg349 | 680-680 bands | View Comparative Map | ||||
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| Map Type | Map Set | Name | Map | Position | Ext. Links | |||
|---|---|---|---|---|---|---|---|---|
| Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 5 | 7,126,503-7,126,973 bp | View Comparative Map | |||
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Associations (5)
| Species | Type | Name | Assoc. Type |
|---|---|---|---|
| Zea mays subsp. mays | OVERGO | CL10675_1_ov | contained_in_sequence |
| Zea mays subsp. mays | Maize Bin | Bin 8.04 | bin_marker |
| Zea mays | Clone | ZMMBBc0003J13 | hybridisation |
| Zea mays | Clone | ZMMBBc0030D17 | hybridisation |
| Zea mays | Clone | ZMMBBc0155L01 | hybridisation |
Associated Ontologies (0)
Images (0)
