Zea mays Genomic DNA "AF298118"

27873

Name

AF298118 (GenBank Accession {description

)

Synonyms (2)

umc2109

GenBank GI {description

11177539

GenBank Version {description

MaizeGDB cDNA - EST

MaizeGDB PCR - SSR

MaizeGDB PCR - SSR

MaizeGDB PCR - SSR

MaizeGDB PCR - SSR

MaizeGDB PCR - SSR

MaizeGDB PCR - SSR

MaizeGDB PCR - SSR

MaizeGDB PCR - SSR

MaizeGDB PCR - SSR

MAIZEGDB EST

Type

Species

Zea mays (Maize) [ GR_tax:014450 ]

Germplasm

Description

Zea mays putative transcription factor Golden2 gene, complete cds.

Tags ()

None

Source/Library

Details

Marker Created:
Marker Updated:
Internal Marker Accession:	AF298118
Ec Number
Allele
Bound Moiety
Cell Line
Cell Type
Chromosome
Citation
Clone
Clone Lib
Codon Start	1
Comment
Compare
Cons Splice
Country
Dev Stage
Ecotype
Evidence
Exception
Function
Gene
Germline
Haplotype
Insertion Seq
Isolate
Isolation Source
Keyword
Lab Host
Label
Locus Tag
Macronuclear
Map
Mod Base
Mol Type	genomic DNA
Note
Number
Origin
Patent
Phenotype
Plasmid
Pop Variant
Product	putative transcription factor Golden2
Protein Id	AAG32325.1
Pseudo
Rearranged
Ref Authors	Cribb,L., Hall,L.N. and Langdale,J.A.
Ref Location	Submitted (22-AUG-2000) Plant Sciences, University of Oxford, South Parks Road, Oxford OX1 3RB, UK
Ref Pubmed
Ref Title	Direct Submission
Ref Year	2001
Rpt Family
Rpt Type
Rpt Unit
Sex
Specimen Voucher
Standard Name
Sub Clone
Sub Species
Sub Strain
Tissue Lib
Tissue Type
Transl Except
Transl Table
Translation	`MLEVSTLRGPTSSGSKAEQHCGGGGGFVGDHHVVFPTSGDCFAMVDDNLLDYIDFSCDVPFFDADGDILPDLEVDTTELL AEFSSTPPADDLLAVAVFGADDQPAAAVAQEKPSSSLEQTCGDDKGVAVAAARRKLQTTTTTTTTEEEDSSPAGSGANKS SASAEGHSSKKKSAGKNSNGGKRKVKVDWTPELHRRFVQAVEQLGIDKAVPSRILEIMGTDCLTRHNIASHLQKYRSHRK HLMAREAEAATWAQKRHMYAPPAPRTTTTTDAARPPWVVPTTIGFPPPRFCRPLHVWGHPPPHAAAAEAAAATPMLPVWP RHLAPPRHLAPWAHPTPVDPAFWHQQYSAARKWGPQAAAVTQGTPCVPLPRFPVPHPIYSRPAMVPPPPSTTKLAQLHLE LQAHPSKESIDAAIGDVLVKPWLPLPLGLKPPSLDSVMSELHKQGVPKIPPAAATTTGATG`
Transposon
Variety

Database Cross-References (2)

PubMed	11606553
Gramene Literature	Cribb-L, Hall-L-N, Langdale-J-A, "Four mutant alleles elucidate the role of the G2 protein in the development of C(4) and C(3) photosynthesizing maize tissues", Genetics, 2001, vol. 159, pp. 787-797

Sequences (2)

Genomic DNA Sequence (1)

>AF298118 Zea mays Genomic DNA [5168 bp].

 
          TCATGTAACTTGTATTCTGCGGTTGATAGTTGATCTGTTTCCTCGTGGTCGTTTGCTCCTCCATATTGGAGGGAATTTTC
GCATGTAAATCTTTGTGTCTATTTTATTTCGTAACAAAATCTATAGATTCTAAAAAGCTAAAACTTATTATAGTTTAGAA
CGGAGGGGCAGTGGATATAGGCCGAGTGGTATGGCACCGTAACTGTAAATAACATGCATGCATGGAGACGACGACGCATG
TAGATTATATATCGTAGTGGGGTTCCGGAACAATATACAAAAAACATATATGCGTGTATTTAATTATTATTTGTGGCGGC
TGGTGCATGTGAACTACTGGAATAATAATGGTGAAATTGAGGAGGGTGCACTGACTGAGATACGGTAGACATGCATAGAT
AAGCACTGCGGAGCCATGCTGCCTGCCTGCAATAATGCTTGTGTGTATACAGCGACACGACACGAGACGAGAGGGAGGGT
GAACTGAAAGAGAGACCCGGCTAGAGCTATAAAGCAAGTGGGGGAAGAGAGAGAGAGAGGAGAAGGAGAAGGAGAGGTTT
TTATGTATGTGTGGTGGACATGCGTCCTCCTGTCGTCTCGAGAGAGCGGAGGCCCTAATACTCCAATCACCACGCACCAA
ACTAGCTAGCTAGCAGTCGTCTTGCATTGTAGCTAGTCCATTGCTCTCATCTTCTCTTCTTCTTCCCCCAGTCCTCCCCC
CCTTTCCCCTCTTCGGCCTCTCTCGCTCAGCTCACTCTTCATTAAGCGAGCTCACGTCGTTCCTCCCTTCTTCTTCTTCT
TATCCGTTGTTCAATTCGTTCAGCTAGCCGGCCAGAGATCGAGCATCATCTCCATCATCGATTCATCCATCTCATCTTTC
TCTTCTTCTATTCTATGTCGTCGTCGTCCCAGATTAGATCGAAGCTGCTAGCAGTCTATCCAGTCTCTAGCTAGCTAGCT
AGATCAAGCCCGCAGACTATACAATATAATACAAGCTAGCTACGTGCTTATTATTGCTTTATTAGTCTAGAATAATCTTG
ATATATACGATCGAACATATATCTCGATCTCCACCGATACACACCCGGCCCTATCCATGCTTGAGGTGTCGACGCTGCGC
GGCCCTACTAGCAGCGGCAGCAAGGCGGAGCAGCACTGCGGCGGCGGCGGCGGCTTCGTCGGCGACCACCATGTGGTGTT
CCCGACGTCCGGCGACTGCTTCGCCATGGTGGACGACAACCTCCTGGACTACATCGACTTCAGCTGCGACGTGCCCTTCT
TCGACGCTGACGGGGACATCCTCCCCGACCTGGAGGTAGACACCACGGAGCTCCTCGCCGAGTTCTCGTCCACCCCTCCT
GCGGACGACCTGCTGGCAGTGGCAGTATTCGGCGCCGACGACCAGCCGGCGGCGGCAGTAGCACAAGAGAAGCCGTCGTC
GTCGTTGGAGCAAACATGTGGTGACGACAAAGGTGTAGCAGTAGCCGCCGCCAGAAGAAAGCTGCAGACGACGACGACGA
CGACGACGACGGAGGAGGAGGATTCTTCTCCTGCCGGGTCCGGGGCCAACAAGTCGTCGGCGTCGGCAGAGGGCCACAGC
AGCAAGAAGAAGTCGGCGGGCAAGAACTCCAACGGCGGCAAGCGCAAGGTGAAGGTACTAACTGCTGCTGCTAGCGCTTA
TATATTTAATTAGCTATCTTGCTCTTGCTTGCCCTAGCTGTTGAGCTAGCATGCACATCATATCGCCTGATGGATGCTAC
ATCTATATATCTATCTATATATGTGGTTTTGCTACTAGTTAATTTCCCTTTCTTGCATGCTGAAGAGAAATTAATTAAGA
AAAATCTATATGTGCTAGCTATTTGAAACTAATTCGAAAGATTAGACAAATAAATCTATCAGATCTGACGGCCGGGCCGG
GGGGAGGAGCCATCATCGTCGTCGTGCATGGAGGGCAATTGAAGGGCAATGAATAGAGCCATGAGAATCCCCGTGTACTA
CATACATAGGCTCCCTTTTTCCGGTTGGTCGGGCACGGATGAAGAGGAAAGGATCATATCGTCGATAGCATCACATCCCC
CATCCATCCATCCATCAAATGAAACACGCACAAGCAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAGAGTGTCACGGGAT
CTCAAGCACCAGTGACAGTGTTCTAGCTCATCACCCCTCTCCTCTCTTTATTTCCTGCTAGTCAGACACGGTACAAGTCG
CACAGAGTCCATCTTGTCCTGCAGCTAGCTAGCTAGCTGCCACATGCGGCATGCATTATGCAGCCAGGACGACAAAATCT
ACTTTTTATCGTTTACATTTACACGCCGGACTGCATACCTGCCTGCTGCTCATCTATATATATGGTTTTGTTGGTGTGAG
TAGCACTCCTCATGTCCTTGGTTCTACTCCTCGTGTGAGTAAATTTTTAGGCGGTGGGTAAAAAAATCCACTCGTCTGTC
CCACGCCAAAGCACAGGTTTAAGACCTGGTCGCGGTCATTCTCACATAGACTACGGTGTCACTATGTATGAGTGAGGCAG
GGGTTTGGAAATTTTGTAGACCTACGTAATAAGGTCTTCTTCTTGTTAACCTCCACAGACCACCTTATTTGAGTATAGTA
CTGTACACTGTGGCTAGCAATCTAACATGCATATTGCCTGTATTTTAGTTAGTTAAAAGTTGCTTATTTCAGTAATATAT
AGAATTTACATGCAATGCATTGGTCGATCTGCTAGCTTAATTTAGCTCCATGCAAGCATCCATCTATATATGTATCTGAT
GATGACGACGACACATGTGCATTAATTTATGCATTATTATTGTTAATTACCAGGTGGACTGGACGCCGGAGCTGCACCGG
CGGTTCGTGCAGGCGGTGGAGCAGCTGGGCATCGACAAGGCCGTGCCGTCCAGGATCCTGGAGATCATGGGCACGGACTG
CCTCACAAGGCACAACATTGCCAGCCACCTCCAGGTACGTATGCATAGCATGTGAATCTTCCTAGCTTGTTAATTAGTTA
GTTCTTGCGAATGCCAACATATATGTATATATATATATGTAACTATTGGACATGTGAACAACGTACAACCCAAGCAAGCA
TGCATGCATATTTACTTTTACCGCGCGCCTGCCAACGACAAAGACAAATCTGTACTACTGTACAAGCACCAGCATGATCT
GATCGATTCTGAGGTGTGGTAAAAGTGAAAGCATGCATATTAACTAATTTGAAAAACAAACGTACAACTGTACAAGTGGT
GGCATGCATGCATGCATTATGTTAGCAGCACGCAGACGCAGGAGCAAAGAGGCAGGAGGCCAGCAGCAGGCAGGCAGCTA
GAGATCGATGCAAGAAAGCAAAGCAAATTGTCAATGGGGGCCGGGGGCAGGCAGGCATGCATCCCGATGTTGCATGTAGC
TTCTTGTTCTTGGACTGGATTGGACTGCAGATATTCCTTCCGATCCCTTTTAATTTGCAAAGAGAGGTGGTACATACATT
ACATACTACGGCCACTACTAGCTGCTTGCTTGCTTTGCTTTGCTTGTGGGGCGCCTCTGCACTGCACTGCACTGCATGCC
TGTGGATCACCAGCTGCCGAGACTTTCTTTAGTTTGTGATGAATGAATTCAAAGGAAATTATTACCACAAGCTAGCTAGT
TAGCTAGAAACCTCGTCATGTGGCATGCATTGATGATGCACAACAATAATAACTGCTAAATCATTTGCTTGCAGAAGTAC
CGGTCGCACAGAAAGCACCTGATGGCGCGGGAGGCGGAGGCCGCCACCTGGGCGCAGAAGCGCCACATGTACGCGCCGCC
AGCTCCAAGGACGACGACGACGACGGACGCCGCCAGGCCGCCGTGGGTGGTGCCGACGACCATCGGGTTCCCGCCGCCGC
GCTTCTGCCGCCCGCTGCACGTGTGGGGCCACCCGCCGCCGCACGCCGCCGCGGCTGAAGCAGCAGCGGCGACTCCCATG
CTGCCCGTGTGGCCGCGTCACCTGGCGCCGCCCCGGCACCTGGCGCCGTGGGCGCACCCGACGCCGGTGGACCCGGCGTT
CTGGCACCAGCAGTACAGCGTGAGTGCTCCTCCGTCCCCTGCTGGACCTCGCAGGCATGCATGCATAGTGCGTGCATGTG
ATCCATCCACTCTCGCTTTTTTCTAATTTTTTTTTGGCAGCTTGCTTCGTTTGGCTCTACTAGCTAGCTAGCTACACTGT
GTCGTCGTTGTAATTGCTTACTACCTACTGTGATTCATTCATTGACTTGTCTTCCGCCTCCCGCCCCATGCAGGCTGCCA
GGAAATGGGGCCCACAGGCAGCCGCCGTGACGCAAGGGACGCCATGCGTGCCGCTGCCGAGGTTTCCGGTGCCTCACCCC
ATCTACAGCAGACCGGCGATGGTACCTCCGCCGCCAAGCACCACCAAGCTAGCTCAACTGCATCTGGAGCTCCAAGCGCA
CCCGGTAATTAATAATCTAGCTATATATATAAATGCACGCATTATTGTGTGTACTGAATATATATATATATATATAAATA
TATATATAATCCAAATGTGCAAAACAATGCAGTCCAAGGAGAGCATCGACGCAGCCATCGGAGATGTTTTAGTGAAGCCA
TGGCTGCCGCTTCCACTGGGGCTCAAGCCGCCGTCGCTCGACAGCGTCATGTCGGAGCTGCACAAGCAAGGCGTACCAAA
AATCCCACCGGCGGCTGCCACCACCACCGGCGCCACCGGATGACATACTATCTCGTCGACAATACATGCATGTACAATAG
ACGGATGTCTAGTAGTATAGTAGATTGCTGCTAGCTAGCTAGCCGCTAGAGTGTAGTAGCATATGCATGCCTTTTTTTTC
TTCTTCTTTTTTTGCCCTTATTATTAAGCTGGCTAATAGCGATTGAGATGGAGCTTGACACAGATCTGCTAGCTAGCTAT
TTGAGGGTTTCTCTTGTATGCTACCTATTGCTGCTGCTTGCTGCTGAGACAAGTAATGTACGTACGCCTGTGCAAACGAC
ACATCGGATTGTATTGTATTACTAGTTATATGAACAACAACAATAATAATAGGCACATGCATGCCTGCCTAGTATGTGAG
CTGCTAGCTAGCTACATGCATGTTGCGCATTCCTTTCCTGTCAGGATC

Related Sequence (1)

>siAF298118_ov Zea mays subsp. mays OVERGO [40 bp]. Associated to 'AF298118' via contained_in_sequence

 
          AAGCACCACCAAGCTAGCTCAACTGCATCTGGAGCTCCAA

Align All Sequences

Map Positions (4)

unclassified (4)

Map Type

Map Set

Name

Map

Position

Ext. Links

Genetic

BNL 1996

BNL6.32

0-0 cM

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Details

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IBM 2002

BNL6.32

2-2 cM

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Physical

AGI FPC Oct 2004

p-bnl6.32

ctg102

22-25 bands

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Curated AGI FPC Oct 2004

BNL6.32

ctg102.3

22-25 bands

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Associations (1)

Species	Type	Name	Assoc. Type
Zea mays subsp. mays	OVERGO	siAF298118_ov	contained_in_sequence

Associated Ontologies (0)

Images (0)