ID | 16943 |
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Name | RG553 |
Synonyms (1) | RG553(C) |
Type | RFLP |
Species | Oryza sativa (Oryza sativa) [ GR_tax:013681 ] |
Germplasm | |
Description | |
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | RG553 |
DNA Treatment | PstI-digested |
Source Type | Genomic |
Source Tissue | leaf |
Source Treatment | |
Vector | pGEM4Z |
Vector Antibiotic Resistance | Ampicillin |
Fragment Size | 0.7 |
Vector Excision Enzyme | PstI |
Vector Primers | M13 forward/M13 reverse |
Overgo1 | |
Overgo2 |
Gramene Literature | McCouch-S-R, Kochert-G, Yu-Z-H, Wang-Z-Y, Khush-G-S, Coffman-W-R, Tanksley-S-D, "Molecular mapping of rice chromosomes", Theoretical and applied genetics, 1988, vol. 76, pp. 815-829 |
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Gramene Diversity Rice Marker | 797 |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 9 | 9,216,346-9,216,863 bp | View Comparative Map | |||
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BNL6.32 | Chr. 9 | 9,216,376-9,216,790 bp | View Comparative Map | |||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | KRGRP 1998 | BNL6.32 | 9 | 29.6-29.6 cM | View Comparative Map | |||
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TTU CTIR 2000 | BNL6.32 | 9 | 14.4-14.4 cM | View Comparative Map | ||||
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QTL | AGEBC KDM105/CT999 RI QTL 2000 | BNL6.32 | 9 | 48.1-48.1 cM | View Comparative Map | |||
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CNRRI Tes/CB QTL 1997 | BNL6.32 | 9 | 16.5-16.5 cM | View Comparative Map | ||||
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CNRRI Tes/CB QTL 1998 | BNL6.32 | 9 | 0-0 cM | View Comparative Map | ||||
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CTIR CT9993/IR6226 QTL 2000 | BNL6.32 | 9 | 14.4-14.4 cM | View Comparative Map | ||||
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FAUF Gui630/Twj DH QTL 2001 | BNL6.32 | 9 | 23.3-23.3 cM | View Comparative Map | ||||
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IRRI IR622/IR600 QTL 2003 | BNL6.32 | 9 | 0-0 cM | View Comparative Map | ||||
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IRRI Mor/CO39 QTL 1994 | BNL6.32 | 9 | 4.8-4.8 cM | View Comparative Map | ||||
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KRGRP Mil23/Gih QTL 1998 | BNL6.32 | 9 | 29.6-29.6 cM | View Comparative Map | ||||
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MU CT9993/IR6226 QTL 2004 | BNL6.32 | 9 | 14.5-14.5 cM | View Comparative Map | ||||
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TKU Integrated QTL 2002 | BNL6.32 | 9 | 43-43 cM | View Comparative Map | ||||
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TNCGEB CT9993/IR6226 QTL 2004 | BNL6.32 | 9 | 8-8 cM | View Comparative Map | ||||
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UCD IR40931/PI543851 QTL 1996 | BNL6.32 | 9 | 42.5-42.5 cM | View Comparative Map | ||||
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UCD Lab/Bla QTL 1998 | BNL6.32 | 9 | 12-12 cM | View Comparative Map | ||||
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Zejiang IR64/Azu DH QTL 2001 | BNL6.32 | 9 | 19.2-19.2 cM | View Comparative Map | ||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Huazhong RFLP 1997 | BNL6.32 | 9 | 17.5-17.5 cM | View Comparative Map | |||
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Species | Type | Name | Assoc. Type |
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Oryza sativa | QTL | AQEP006 | qtl_marker |
Oryza sativa | QTL | AQFF040 | qtl_marker |
Oryza sativa | QTL | AQFT005 | qtl_marker |
Oryza sativa | QTL | AQHP014 | qtl_marker |
Oryza sativa | QTL | AQHP030 | qtl_marker |
Oryza sativa | QTL | AQHP046 | qtl_marker |
Oryza sativa | QTL | AQHQ010 | qtl_marker |
Oryza sativa | QTL | AQR039 | qtl_marker |
Oryza sativa | QTL | CQAT1 | qtl_marker |
Oryza sativa | QTL | CQAW27 | qtl_marker |
Oryza sativa | QTL | CQH30 | qtl_marker |
Oryza sativa | QTL | CQH32 | qtl_marker |
Oryza sativa | QTL | DQA6 | qtl_marker |
Oryza sativa Indica Group | Genomic DNA | AF490708 | related_sequence |
Oryza sativa Indica Group | GSS | AQ074203 | related_sequence |
Oryza sativa Indica Group | Genomic DNA | AF490708 | contained_in_sequence |