ID | 16800 | ||
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Name | RG96 | ||
Synonyms (2) |
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Type | RFLP | ||
Species | Oryza sativa (Oryza sativa) [ GR_tax:013681 ] | ||
Germplasm | |||
Description | |||
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | RG96 |
DNA Treatment | PstI-digested |
Source Type | Genomic |
Source Tissue | leaf |
Source Treatment | |
Vector | pUC8 |
Vector Antibiotic Resistance | Ampicillin |
Fragment Size | 1 |
Vector Excision Enzyme | PstI |
Vector Primers | M13 forward/M13 reverse |
Overgo1 | |
Overgo2 |
Gramene Literature | McCouch-S-R, Kochert-G, Yu-Z-H, Wang-Z-Y, Khush-G-S, Coffman-W-R, Tanksley-S-D, "Molecular mapping of rice chromosomes", Theoretical and applied genetics, 1988, vol. 76, pp. 815-829 |
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Gramene Diversity Rice Marker | 816 |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 3 | 22,798,284-22,798,856 bp | View Comparative Map | |||
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BNL6.32 | Chr. 3 | 22,798,862-22,799,337 bp | View Comparative Map | |||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | KRGRP 1998 | BNL6.32 | 3 | 120.3-120.3 cM | View Comparative Map | |||
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BNL6.32 | 4 | 131.9-131.9 cM | View Comparative Map | |||||
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QTL | CNRRI Tes/CB QTL 1997 | BNL6.32 | 3 | 113.5-113.5 cM | View Comparative Map | |||
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CNRRI Tes/CB QTL 1998 | BNL6.32 | 3 | 123-123 cM | View Comparative Map | ||||
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CNRRI Wai/CB QTL 1996 | BNL6.32 | 3 | 148.6-148.6 cM | View Comparative Map | ||||
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CNRRI XeiB/Mil46 RI QTL 2002 | BNL6.32 | 3 | 88.6-88.6 cM | View Comparative Map | ||||
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CNRRI Zh97B/Mil46 RI QTL 2002 | BNL6.32 | 3 | 63.6-63.6 cM | View Comparative Map | ||||
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IRRI Mor/CO39 QTL 1994 | BNL6.32 | 3 | 76.7-76.7 cM | View Comparative Map | ||||
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KRGRP Mil23/Gih QTL 1998 | BNL6.32 | 3 | 120.3-120.3 cM | View Comparative Map | ||||
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BNL6.32 | 4 | 131.9-131.9 cM | View Comparative Map | |||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Cornell RFLP 1994 | BNL6.32 | 3 | 58.6-58.6 cM | View Comparative Map | |||
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Cornell RFLP 2001 | BNL6.32 | 3 | 65.1-65.1 cM | View Comparative Map | ||||
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Species | Type | Name | Assoc. Type |
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Oryza sativa | QTL | AQCF003 | qtl_marker |
Oryza sativa | QTL | AQCF017 | qtl_marker |
Oryza sativa | QTL | AQDQ028 | qtl_marker |
Oryza sativa | QTL | AQDQ029 | qtl_marker |
Oryza sativa | QTL | AQEJ067 | qtl_marker |
Oryza sativa | QTL | AQEJ069 | qtl_marker |
Oryza sativa | QTL | AQEJ081 | qtl_marker |
Oryza sativa | QTL | AQEJ083 | qtl_marker |
Oryza sativa | QTL | AQGR002 | qtl_marker |
Oryza sativa | QTL | AQHP005 | qtl_marker |
Oryza sativa | QTL | AQHP006 | qtl_marker |
Oryza sativa | QTL | AQHP023 | qtl_marker |
Oryza sativa | QTL | AQHP024 | qtl_marker |
Oryza sativa | QTL | AQHP040 | qtl_marker |
Oryza sativa | QTL | AQHP051 | qtl_marker |
Oryza sativa | QTL | AQHP069 | qtl_marker |
Oryza sativa | QTL | AQHQ003 | qtl_marker |
Oryza sativa | QTL | CQAV2 | qtl_marker |
Oryza sativa | QTL | CQAW10 | qtl_marker |
Oryza sativa | QTL | CQAW9 | qtl_marker |
Oryza sativa Indica Group | Genomic DNA | G73747 | related_sequence |
Oryza sativa Indica Group | GSS | AQ074262 | related_sequence |
Oryza sativa Indica Group | Genomic DNA | G73747 | contained_in_sequence |