ID | 13192 |
---|---|
Name | RM345 |
Synonyms (1) | CTT97 |
Type | SSR |
Species | Oryza sativa Indica Group (Oryza sativa indica) [ GR_tax:013682 ] |
Germplasm | |
Description | |
Tags () | None |
Marker Created: | |
---|---|
Marker Updated: | |
Internal Marker Accession: | RM345 |
Repeat Motif | (CTT)9 |
Anneal Temperature | 55 |
Expected PCR Product Size | 167 |
Sequence Source | AF344169 |
Linkage Group | |
Remarks |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 6 | 30,864,845-30,864,999 bp | View Comparative Map | |||
|
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Genetic | IRMI 2003 | BNL6.32 | 6 | 123.9-123.9 cM | View Comparative Map | |||
|
||||||||
QTL | CAU IRAT109/YUEFU QTL 2004 | BNL6.32 | 6b | 9.4-9.4 cM | View Comparative Map | |||
|
||||||||
CNHZAU Zhe97/Wuy2 QTL 2004 | BNL6.32 | 6 | 140.6-140.6 cM | View Comparative Map | ||||
|
||||||||
CNNAU IR50/Tatsumimochi/Miyukimochi SSR QTL 2006 | BNL6.32 | 6 | 140.6-140.6 cM | View Comparative Map | ||||
|
||||||||
Cornell IR64/IRG105 QTL 2003 | BNL6.32 | 6 | 184.2-184.2 cM | View Comparative Map | ||||
|
||||||||
IRRI RD23/Olong F2 QTL 2003 | BNL6.32 | 6 | 197.4-197.4 cM | View Comparative Map | ||||
|
||||||||
NDSU EM93/SS18 BC QTL 2004 | BNL6.32 | 6 | 169.9-169.9 cM | View Comparative Map | ||||
|
Species | Type | Name | Assoc. Type |
---|---|---|---|
Oryza sativa | QTL | AQAM038 | qtl_marker |
Oryza sativa | QTL | AQAM039 | qtl_marker |
Oryza sativa | QTL | AQEI013 | qtl_marker |
Oryza sativa | QTL | AQEI080 | qtl_marker |
Oryza sativa | QTL | AQFJ026 | qtl_marker |
Oryza sativa Indica Group | Primer | RM345_forward | primer_forward |
Oryza sativa Indica Group | Primer | RM345_reverse | primer_reverse |
Oryza sativa Indica Group | Genomic DNA | AF344169 | contained_in_sequence |
Oryza sativa Indica Group | Genomic DNA | AF344169 | source_sequence |
|