ID | 12469 |
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Name | RM297 |
Synonyms (1) | CT807 |
Type | SSR |
Species | Oryza sativa Indica Group (Oryza sativa indica) [ GR_tax:013682 ] |
Germplasm | |
Description | |
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | RM297 |
Repeat Motif | (GA)13 |
Anneal Temperature | 55 |
Expected PCR Product Size | 148 |
Sequence Source | AF344123 |
Linkage Group | |
Remarks |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 1 | 32,099,566-32,099,760 bp | View Comparative Map | |||
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BNL6.32 | Chr. 1 | 32,099,620-32,099,860 bp | View Comparative Map | |||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | IRMI 2003 | BNL6.32 | 1 | 132-132 cM | View Comparative Map | |||
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QTL | CNHAU Zhen97/ H94 QTL 2005 | BNL6.32 | 1 | 126.3-126.3 cM | View Comparative Map | |||
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CNHAU Zhenshan 97/IRAT109 SSR QTL 2006 | BNL6.32 | 1 | 161.3-161.3 cM | View Comparative Map | ||||
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CNYU Bal/Nan//Bal BC1 QTL 2001 | BNL6.32 | 1a | 21.1-21.1 cM | View Comparative Map | ||||
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INDIR IR58025/O. rufipogon BC SSR QTL 2005 | BNL6.32 | 1 | 180.6-180.6 cM | View Comparative Map | ||||
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IRRI RD23/Olong F2 QTL 2003 | BNL6.32 | 1 | 96.4-96.4 cM | View Comparative Map | ||||
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JHPRC Rei/Yamd QTL 2002 | BNL6.32 | 1b | 74.5-74.5 cM | View Comparative Map | ||||
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JUT Akihi/IRAT109 QTL 2004 | BNL6.32 | 1 | 102.88-102.88 cM | View Comparative Map | ||||
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LSU Caiapo/IRGC103544 QTL 2004 | BNL6.32 | 1 | 60.7-60.7 cM | View Comparative Map | ||||
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M202/IR50 UCD QTL 2003 | BNL6.32 | 1 | 123.7-123.7 cM | View Comparative Map | ||||
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NDSU EM93/SS18 BC QTL 2004 | BNL6.32 | 1 | 158.7-158.7 cM | View Comparative Map | ||||
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Species | Type | Name | Assoc. Type |
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Oryza sativa | QTL | AQAM001 | qtl_marker |
Oryza sativa | QTL | AQAM002 | qtl_marker |
Oryza sativa | QTL | AQDU006 | qtl_marker |
Oryza sativa | QTL | AQFQ006 | qtl_marker |
Oryza sativa | QTL | AQFU001 | qtl_marker |
Oryza sativa | QTL | AQFU020 | qtl_marker |
Oryza sativa | QTL | AQFU028 | qtl_marker |
Oryza sativa | QTL | AQFU038 | qtl_marker |
Oryza sativa | QTL | AQFU040 | qtl_marker |
Oryza sativa | QTL | AQFU042 | qtl_marker |
Oryza sativa | QTL | AQGA029 | qtl_marker |
Oryza sativa | QTL | AQHF014 | qtl_marker |
Oryza sativa | QTL | AQHF019 | qtl_marker |
Oryza sativa | QTL | AQT001 | qtl_marker |
Oryza sativa Japonica Group | SSR | AUT11704 | equivalent_to |
Oryza sativa | QTL | CQAA6 | qtl_marker |
Oryza sativa Indica Group | Primer | RM297_forward | primer_forward |
Oryza sativa Indica Group | Primer | RM297_reverse | primer_reverse |
Oryza sativa Indica Group | Genomic DNA | AF344123 | contained_in_sequence |
Oryza sativa Indica Group | Genomic DNA | AF344123 | source_sequence |
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